Protein Alignment tll and nhr-107

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_504770.2
• Gene: nhr-107 / 179083
• WormBaseID: WBGene00003697
• Length: 357
• Species: Caenorhabditis elegans
• Alignment Length: 389
• Identity: 69/389 - (17%)
• Similarity: 122/389 - (31%)
• Gaps: 136/389 - (34%)

  Fly    32 VPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSR-QYVCKSQKQGLCVVDKTHRNQCRACRLRK 95
            |.|.||...|:..|:|..||..||.||:|.:...: ..:||      |:..|..:..||.||::|
 Worm     2 VNCMVCDASSAQYHFGAIACRACAAFFRRYVNSKKLTILCK------CLSKKESQYPCRLCRMKK 60

  Fly    96 CFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQI----------PAEILMNTAALTG 150
            |..|||....||..|...|.        :|..|:.....|:.          |.:..:....:..
 Worm    61 CKAVGMEASKVQGPRDVNNP--------FKIKMIEGSSSPESTLSSIEYGLQPRDSELIKLIIKN 117

  Fly   151 FPGVPMPMPGL----PQRAGHHPAHM----------------------------------AAFQP 177
            :..:.|....:    |...|....::                                  ..|..
 Worm   118 YKNLEMTREAIYNMTPSTTGTMQVNLYELSLEVKTDSKLMWKLCEDTFPEFNQLCKMDKRILFNN 182

  Fly   178 PPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFK 242
            ..|..::|::::....::    ....|:||:.|...::
 Worm   183 FYSKWSILEVTMLATKYN----DSKNFYSPSGAMCTSI--------------------------- 216

  Fly   243 NVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESENANREIMGMV- 306
            |..::.:||..:.:...|.:.:.|..||..|    .|.:.|....:|     ::..|..:.|::
 Worm   217 NEFYVNTVRDNSAISQEDIIRVFEPYWKYHF----EQVIDPFLALKL-----NDMENMALFGIIF 272

  Fly   307 -TREVHAFQEVLNQLCH------------------------------LN-IDSTEYECLRAISL 338
             ........:.|::|||                              || |:..|.:|...|:|
 Worm   273 WDGSYTNISDELSELCHSMRKIICRELSAHFNETCTTSSRFFETLDTLNIIEKAERKCQEEIAL 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	31/85 (36%)
		NR_LBD	215..436	CDD:416257	24/157 (15%)
nhr-107	NP_504770.2	ZnF_C4	3..66	CDD:197701	24/68 (35%)
		NR_LBD	145..325	CDD:132726	27/219 (12%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910