Protein Alignment tll and nhr-115

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001256014.1
• Gene: nhr-115 / 178708
• WormBaseID: WBGene00003705
• Length: 391
• Species: Caenorhabditis elegans
• Alignment Length: 394
• Identity: 86/394 - (21%)
• Similarity: 132/394 - (33%)
• Gaps: 146/394 - (37%)

  Fly    27 RILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQ--CR 89
            ::|:  ||::|..:|.|.|:||.:|..||.||:||:.      .|..::| |:.:...:..  |:
 Worm     3 KVLF--PCQICGQNSHGTHFGIVSCRACAAFFRRSVN------SKWARKG-CLTNFKDKGSCFCK 58

  Fly    90 ACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGV 154
            .||||||.|:||:....|::|               || :.|.:.|:|             ||.|
 Worm    59 PCRLRKCVEIGMDASKFQYDR---------------DA-ISAIKHPKI-------------FPSV 94

  Fly   155 PMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDL-----SVPRVPHH----PVHQGHH------GF 204
            ...: |.|:......:::.      |....:|:     .|.|...|    |::..:.      ||
 Worm    95 SYYV-GRPEFLMFSDSNVT------SQKTFIDVQNLVFEVSRYLDHGCETPIYAENQLKKLTLGF 152

  Fly   205 FSPTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKNV-NWIKSVRAFTELPMPDQLLLLEES 268
            ......|.|      :.....:..||.|  ...|:.|..| .||.....|.:|....|:.||:..
 Worm   153 KLMQFDYQN------VKFFDKIGKAEFI--DIIEYYFLTVAKWIAHFDEFRKLDQSLQIKLLQAI 209

  Fly   269 WK--------------------------------------------------------------- 270
            |.
 Worm   210 WHVWSKIHKCASTAFYRKSNPNAKPTQKILRNVCMDRMHVHKLDTSWMSDYPTEHVTRFMLTHHV 274

  Fly   271 -EFFILAMAQYLMPMN------FAQLLFVYESENANREIMGMVTREVHAFQEVL-NQLCHLNIDS 327
             :|.|:.....|.|.:      ||||.|.|    |.:...|.:.:....||:|| |.|.|..|..
 Worm   275 YDFKIVESLLKLDPTDVELTFMFAQLCFEY----AGKRFQGEILKITDHFQQVLSNDLHHYYITD 335

  Fly   328 TEYE 331
            ...|
 Worm   336 QRRE 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	31/91 (34%)
		NR_LBD	215..436	CDD:416257	35/189 (19%)
nhr-115	NP_001256014.1	ZnF_C4	7..73	CDD:197701	28/72 (39%)
		Hormone_recep	160..365	CDD:278530	36/192 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910