Protein Alignment tll and nhr-13

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001024269.1
• Gene: nhr-13 / 178696
• WormBaseID: WBGene00003612
• Length: 425
• Species: Caenorhabditis elegans
• Alignment Length: 405
• Identity: 80/405 - (19%)
• Similarity: 125/405 - (30%)
• Gaps: 159/405 - (39%)

  Fly    34 CKVC--RDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKC 96
            |:||  ..:||..|:|...|..||.||:|::.....|.|..|... |.|....|..||.|||:||
 Worm     8 CEVCSSSSNSSCNHFGARTCKACAAFFRRTVSMKLDYQCIDQPDA-CRVHCDSRVICRFCRLKKC 71

  Fly    97 FEVGM----------------------------------NKDAVQHERGPRNSTLRRHMAMYKDA 127
            .::||                                  |.:.:|::..|:.|...    |..::
 Worm    72 HDIGMKPLLVKSKNERKNYIRISKGLIRKRSVLGDNVKENSEEIQNDDDPQESDAE----MENES 132

  Fly   128 MMGAGEMP-------------------------------QIPAEILMNTAALTGFPGVPMPM--P 159
            ..|....|                               :.|..|::.:.....:...|:.|  .
 Worm   133 TPGPSSEPSENVSAENQETVTKFLKLEASMCDRRRLLYAETPISIVLESGKEWPYENAPLKMFDY 197

  Fly   160 GLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGF-------------------F 205
            .|.|....|...|           ::|.:          :|..||                   |
 Worm   198 KLSQGMSKHDFVM-----------IMDYA----------RGMPGFDEMNYADSVFCYRLVCAVDF 241

  Fly   206 SPTAAYM--------NALAT---RALPPTP-PLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPM 258
            ...:||.        |.|..   ..:|..| ||...|.    .|..||::.:.:...|..    |
 Worm   242 VINSAYYTYKRGIEHNELVLSDGTFIPMVPTPLTGYEE----NANLLFQSQDDLMKFRTL----M 298

  Fly   259 PDQLLLLEESWK------------EFFILAMAQYLMPMNFAQLLFVYESENANREIMGMVTREVH 311
            |    |:...|:            |.|.|..|..:..:::.:|     ||:..|..:....|.:.
 Worm   299 P----LILHQWETCVPFAQLAPSHEEFCLLKAICVWHVSYYRL-----SEDGRRIAIAQRNRLIR 354

  Fly   312 AFQEVLNQLCHLNID 326
            |    |:.:|||:.|
 Worm   355 A----LHHVCHLDSD 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	32/118 (27%)
		NR_LBD	215..436	CDD:416257	29/128 (23%)
nhr-13	NP_001024269.1	ZnF_C4	21..79	CDD:197701	23/58 (40%)
		NR_LBD	198..382	CDD:132726	41/210 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910