Protein Alignment tll and nhr-106

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_503219.1
• Gene: nhr-106 / 178571
• WormBaseID: WBGene00003696
• Length: 382
• Species: Caenorhabditis elegans
• Alignment Length: 470
• Identity: 96/470 - (20%)
• Similarity: 165/470 - (35%)
• Gaps: 170/470 - (36%)

  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIR-RSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCF 97
            |::|...:.|.|:|...|.|||.||:|::. ::.:..||....  |........||::||:|||.
 Worm     5 CEICEVPAHGIHFGAITCRGCAAFFRRAVNTKTNRKSCKYSSN--CTNFTGKFPQCKSCRMRKCI 67

  Fly    98 EVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLP 162
            ::||                                ||:
 Worm    68 KMGM--------------------------------MPE-------------------------- 74

  Fly   163 QRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNA--LATRALP---- 221
                    .:...||   .:..|::.|.| |:..:...:   :..|..|::.  |.||.|.
 Worm    75 --------KVKVMQP---ISQSLEIFVSR-PNLILFTNN---YDKTRNYIDVSNLITRGLEILKQ 124

  Fly   222 --PTPPLMAAEHIKETAAEHLF-------------KNVN------------WIKSVRAFTELPMP 259
              |||..:...:::..|:...|             |:|:            |:..::.|..|||.
 Worm   125 GFPTPLGIGKTNLERMASGVEFSTAESKIVDVVTGKSVSMVWEFDFISTAKWLTRLQDFCTLPMR 189

  Fly   260 DQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESENANREIMGMVTREVHA-----FQEVLNQ 319
            .|:.||:..|..              ::::..|.:|..         .|:.||     || ||:|
 Worm   190 IQMQLLQTIWHV--------------WSRMYKVVKSSE---------LRKKHADSSNLFQ-VLDQ 230

  Fly   320 LCHLNIDSTE----------YECLRAI------SLFRKSPPSASSTEDLANSSILTGSGSPNSSA 368
            . |:|:.:|:          ||.::..      .::.:|..:|:|..:|.:.. ||...:.....
 Worm   231 F-HVNLGTTKLDVSWLTTYSYEEIKYFLYGIDDDIYLQSAITAASKLELTDVE-LTYMAAQTCFQ 293

  Fly   369 SAESR-GLLESGKVAA-----MHNDARSALHNYIQRTH---PSQPMRFQTLLGVVQLMHKVSSFT 424
            .|::| ...|..:|.|     :.||    ||.|..:.|   .:...:...:|..||.:.|....|
 Worm   294 YAQNRFAGTEIAEVCAKFQEILAND----LHTYYTKDHKRTSNYAGKLSQMLKCVQEIQKSIRTT 354

  Fly   425 IEELFFRKTIGDITI 439
            .|.....:|. ||.|
 Worm   355 RERTTIARTF-DIYI 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	24/83 (29%)
		NR_LBD	215..436	CDD:416257	59/281 (21%)
nhr-106	NP_503219.1	ZnF_C4	4..74	CDD:197701	25/102 (25%)
		Hormone_recep	150..357	CDD:278530	48/236 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910