Protein Alignment tll and nhr-98

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001300155.1
• Gene: nhr-98 / 178568
• WormBaseID: WBGene00003688
• Length: 453
• Species: Caenorhabditis elegans
• Alignment Length: 445
• Identity: 93/445 - (20%)
• Similarity: 151/445 - (33%)
• Gaps: 142/445 - (31%)

  Fly     7 SPDMMDQKY----NSVRLSPAASSRILYHV-----------------------------PCKVCR 38
            |..|:..||    |...:|.||.:.|..|:                             .|::|.
 Worm     4 SQTMVQNKYMQLKNQKIMSAAARTFISIHIGVCFDEMDSPGSSAPSPPDLTIIPKISSKKCQICE 68

  Fly    39 DHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFEVGMNK 103
            :.:.|||:|...|..||.||:|....:....||::.:  |...|.....|:.||:::|.:.||..
 Worm    69 NPAHGKHFGAVTCRACAAFFRRFGISNNFKPCKTENK--CSFRKNGYFSCKKCRMQRCLQFGMTI 131

  Fly   104 DAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLPQRAGHH 168
            |..|.:|.|.| .|:.::.:.:.....:|.    |:.||.:..:.:..|...:.:..|..||..
 Worm   132 DNFQFDREPFN-PLKMNVGIPQTVDTFSGR----PSLILFSAPSGSSGPKRYIDVQFLVDRAVE- 190

  Fly   169 PAHMAAFQPPPSAAAVLD-----LSVPRVPHHPVHQ-----GHHGFFSPTAAYMNALAT------ 217
             ..:...:.|...:.||.     |...|.|...|.|     |..|.|......|..:|.
 Worm   191 -VLLNGSETPYQVSNVLQKLAIGLQNIRGPQQKVSQIVTKIGKEGIFKLWEEEMLRMAKWLTYFD 254

  Fly   218 --RALPPTPPLM----------AAEHIKETAAEH-------------LFKNV------------N 245
              :.||.:..:.          ..|:|..||...             :.|||            :
 Worm   255 DFQRLPHSVQIEILNGVWFLFGRLENIASTALARKRKLCKDDMVMTCVNKNVLICDLRTLEIDLS 319

  Fly   246 WIKSVRAFTELPMPDQ-------------LLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESEN 297
            |. |...|.:|...||             :|.||.:.:|.      .|::    .||.|    ..
 Worm   320 WC-SKYTFQQLKFFDQYDDLRQLDILINAMLDLEPTHEEL------SYMI----CQLCF----HQ 369

  Fly   298 ANREIMGMVTREVHAFQEVLNQLCH-------------------LNIDSTEYECL 333
            ..:::.|.:.:.|...||||:...|                   :.|::|..:||
 Worm   370 VGKKLQGNILKTVEKLQEVLSNNLHDYYVNQMNQPKYSKRIARMMKINNTVEQCL 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	29/120 (24%)
		NR_LBD	215..436	CDD:416257	35/194 (18%)
nhr-98	NP_001300155.1	ZnF_C4	63..132	CDD:197701	22/70 (31%)
		Hormone_recep	220..430	CDD:278530	41/220 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910