Protein Alignment tll and nhr-109

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: NP_001368017.1
• Gene: nhr-109 / 173780
• WormBaseID: WBGene00003699
• Length: 367
• Species: Caenorhabditis elegans
• Alignment Length: 417
• Identity: 86/417 - (20%)
• Similarity: 143/417 - (34%)
• Gaps: 125/417 - (29%)

  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFE 98
            |.:|::...|.|:|..||..||.||:|||..::.|.|.....  |.|....|..||||||.||.|
 Worm    13 CSICQESGDGFHFGAEACRACAAFFRRSISENKLYTCSGNND--CDVTVNIRCMCRACRLTKCIE 75

  Fly    99 VGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIP--AEILMNTAALTGFPGVPMPMPGL 161
            ||||...|:.:.|    :.|:...:...:.....|..::|  :::.:|      :..:......|
 Worm    76 VGMNPVGVRQKPG----SFRKSKELISPSSSNHDEFSRMPILSKMKLN------YENMRNARKAL 130

  Fly   162 PQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHH--PVHQGHHGFFSPTAAYMNALATRALPPTP 224
            ....|.:               |.:..:|:..::  .|.||...:              .|.|
 Worm   131 HNEVGEN---------------VFEEKIPKEINYKESVQQGMKDY--------------TLMP-- 164

  Fly   225 PLMAAEHIKETAAEHLFKNVNWIKS-VRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMN--- 285
                                .|:.| ...|..|....:.:|...|:..||::..| :|..:|
 Worm   165 --------------------EWVSSCFDEFRTLSADQKNILFRNSYIPFFMMETA-FLSHINNMP 208

  Fly   286 ------------FAQLLFVYESENANREIMGMVTREVHAF---------QEVLNQLCHLNIDSTE 329
                        ...|...|.|.|..::|.   |.::...         :.:|..:.:|.:|.
 Worm   209 DSVIFPSGDYCDMKNLERYYNSTNFEKKIS---TEDIENLFKPFYDNYKRSLLLPMMNLQVDI-- 268

  Fly   330 YECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESG-KV-AAMHNDARSAL 392
            ||.|...:|..........|::                       .||.| || |.:..:....|
 Worm   269 YEFLTLFTLLHWDTGLVEITDE-----------------------CLEIGTKVKAEVFKELDFYL 310

  Fly   393 HNYIQRTHPSQPMRFQTLLGVVQLMHK 419
            .|..:...||  :|..|::.::..:||
 Worm   311 TNVKKVAEPS--VRIGTIVNLLPAVHK 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	34/82 (41%)
		NR_LBD	215..436	CDD:416257	41/232 (18%)
nhr-109	NP_001368017.1	ZnF_C4	12..80	CDD:197701	31/68 (46%)
		Hormone_recep	140..349	CDD:395054	45/263 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910