Protein Alignment tll and nr1h4

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_002936891.3
• Gene: nr1h4 / 100489310
• XenbaseID: XB-GENE-487942
• Length: 478
• Species: Xenopus tropicalis
• Alignment Length: 419
• Identity: 97/419 - (23%)
• Similarity: 150/419 - (35%)
• Gaps: 120/419 - (28%)

  Fly    19 RLSPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKT 83
            |:||.. .|:.....|.||.|::||.||....|:||.|||:|||.::..|.||:  .|.|.:|..
 Frog   118 RVSPRV-GRVKGDELCVVCGDNASGYHYNALTCEGCKGFFRRSITKNAVYKCKN--GGNCEMDMY 179

  Fly    84 HRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAM----MGAGEMPQIPAEILMN 144
            .|.:|:.||||||.::||..:.:..|...::..||:|.....:..    :...|..|:.:....|
 Frog   180 MRRKCQECRLRKCKQMGMLAECLLTEIQCKSKRLRKHAKPQSEKSFQEDIDGHETKQVTSTTKTN 244

  Fly   145 --TAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVP-RVPHHPVHQGHHGFFS 206
              ...||                   ...|...|      .|:|..|. |:|
 Frog   245 QENTELT-------------------QEQMNLLQ------YVMDSHVKNRLP------------- 271

  Fly   207 PTAAYMNALATRALPPTPPLMAAE----HIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEE 267
                  .:||||.:....  |.::    .:.|.|..|:...|.:.|.:..|..|...||:.||:.
 Frog   272 ------QSLATRLILQED--MGSDDNFVFLTEMATRHVQILVEFTKKLPGFQTLDHEDQIALLKG 328

  Fly   268 SWKEFFILAMAQYLMPMNFAQLLFVYESENANREIMGMVT-------REVHAFQEVLNQLCH--- 322
            |                 ..:.:|:..:|..||:::...|       |:.....:.:|.:.|
 Frog   329 S-----------------AVEAMFLRSAELFNRKLLERHTDVLEERIRKSGISHDYINPMFHFYK 376

  Fly   323 ----LNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAA 383
                |.:...||..|.|:                   .|||          .:.:.|.:...|..
 Frog   377 SVGELKMVEEEYALLTAV-------------------VILT----------PDRQYLKDKESVEK 412

  Fly   384 MHNDARSALHNYIQRTHPSQPMRFQTLLG 412
            :.......|....:|.||..|..|..|||
 Frog   413 LQETFLHILEKICKRCHPDNPQHFARLLG 441

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	35/91 (38%)
		NR_LBD	215..436	CDD:416257	44/216 (20%)
nr1h4	XP_002936891.3	NR_DBD_FXR	129..212	CDD:143520	34/84 (40%)
		NR_LBD	252..473	CDD:416257	51/263 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910