Protein Alignment tll and rarb

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_002932450.2
• Gene: rarb / 100488600
• XenbaseID: XB-GENE-481009
• Length: 447
• Species: Xenopus tropicalis
• Alignment Length: 427
• Identity: 107/427 - (25%)
• Similarity: 168/427 - (39%)
• Gaps: 119/427 - (27%)

  Fly    21 SPAASSRILYHVPCKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHR 85
            ||....||  :.||.||:|.|||.|||:.||:||.|||:|||:::..|.|..:|.  ||::|..|
 Frog    70 SPPPPPRI--YKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKN--CVINKVTR 130

  Fly    86 NQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTG 150
            |:|:.|||::||||||:|::|:::|..:..
 Frog   131 NRCQYCRLQRCFEVGMSKESVRNDRNKKKK----------------------------------- 160

  Fly   151 FPGVPMPMPGLPQRAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNAL 215
                             .|:.:...:.....|.:.||:      ..:.:.|...| |:...:...
 Frog   161 -----------------EPSKIECIENYEMTAELDDLT------EKIRKAHQETF-PSLCQLGKY 201

  Fly   216 ATRALPPTPPLMAAEH-----------IKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESW 269
            .|.:        :||.           ..|.|.:.:.|.|.:.|.:..||.|.:.||:.||:.:.
 Frog   202 TTNS--------SAEQRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAAC 258

  Fly   270 KEFFILAMAQYLMP----MNFAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEY 330
            .:..||.:.....|    |.|:..|.:..::..|.. .|.:|..|..|   .|||..|.:|.||.
 Frog   259 LDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAG-FGPLTDLVFTF---ANQLLPLEMDDTET 319

  Fly   331 ECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNY 395
            ..|.||.|.         .||                    .:.|.|..||..:......||..|
 Frog   320 GLLSAICLI---------CED--------------------RQDLEEPAKVDKLQEPLLEALKIY 355

  Fly   396 IQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRK 432
            |::..|::|..|..:|..:..:..:|:...|.:...|
 Frog   356 IRKRRPNKPHMFPKILMKITDLRSISAKGAERVITLK 392

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	44/91 (48%)
		NR_LBD	215..436	CDD:416257	54/233 (23%)
rarb	XP_002932450.2	NR_DBD_RAR	75..159	CDD:143522	44/87 (51%)
		NR_LBD_RAR	179..409	CDD:132735	59/262 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910