Protein Alignment tll and rxra

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_012824678.1
• Gene: rxra / 100487877
• XenbaseID: XB-GENE-478718
• Length: 498
• Species: Xenopus tropicalis
• Alignment Length: 464
• Identity: 119/464 - (25%)
• Similarity: 195/464 - (42%)
• Gaps: 103/464 - (22%)

  Fly     6 GSPDM---MDQKYNSVRLSPAASSRILYHVP--------------CKVCRDHSSGKHYGIYACDG 53
            |||.:   |:...::..:.|......:..||              |.:|.|.|||||||:|:|:|
 Frog   107 GSPQIHSPMNSVSSTEDIKPPPGINGILKVPAHPSGPMASFTKHICAICGDRSSGKHYGVYSCEG 171

  Fly    54 CAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFEVGMNKDAVQHERGPRNSTLR 118
            |.|||||::|:...|.|:..|.  |::||..||:|:.||.:||..:||.::.::|.....:..||
 Frog   172 CKGFFKRTVRKDLTYTCRDSKD--CMIDKRQRNRCQYCRYQKCLAMGMKREGMEHHPSQHSRDLR 234

  Fly   119 --RHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLPQRAGHHPAHMAAFQPPPSA 181
              ...|:.::...|. |..:...|                                      .|:
 Frog   235 CQAEQAVQEERQRGK-ERNENEVE--------------------------------------SSS 260

  Fly   182 AAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTPPLMAAEHIKETAAEHLFKNVNW 246
            :|..|:.|.:     :....|.....|..|:.  |...|.|..|.....:|.:.|.:.||..|.|
 Frog   261 SANEDMPVEK-----ILDAEHAVEPKTETYIE--ANMGLAPNSPSDPVTNICQAADKQLFTLVEW 318

  Fly   247 IKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMN----FAQLLFVYESENANREIMGMVT 307
            .|.:..|:|||:.||::||...|.|..|.:.:...:.:.    .|..|.|:.: :|:...:|.:.
 Frog   319 AKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRN-SAHSAGVGAIF 382

  Fly   308 REVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPSASSTEDLANSSILTGSGSPNSSASAES 372
            ..|  ..|:::::..:.:|.||..|||||.||                             :.:|
 Frog   383 DRV--LTELVSKMRDMQMDKTELGCLRAIVLF-----------------------------NPDS 416

  Fly   373 RGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFFRKTIGDI 437
            :||....:|.|:.....::|..|.::.:|.||.||..||..:..:..:....:|.|||.|.|||.
 Frog   417 KGLSNPSEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDT 481

  Fly   438 TIVRLISDM 446
            .|...:.:|
 Frog   482 PIDTFLMEM 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	38/105 (36%)
		NR_LBD	215..436	CDD:416257	59/224 (26%)
rxra	XP_012824678.1	Nuc_recep-AF1	37..143	CDD:371746	7/35 (20%)
		NR_DBD_RXR	150..245	CDD:143514	39/96 (41%)
		NR_LBD_RXR_like	265..476	CDD:132741	62/249 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000