Protein Alignment tll and Nr2e3

DIOPT Version :9

• Sequence 1: NP_524596.1
• Gene: tll / 43656
• FlyBaseID: FBgn0003720
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_038938356.1
• Gene: Nr2e3 / 100365683
• RGDID: 2318602
• Length: 395
• Species: Rattus norvegicus
• Alignment Length: 427
• Identity: 146/427 - (34%)
• Similarity: 214/427 - (50%)
• Gaps: 86/427 - (20%)

  Fly    34 CKVCRDHSSGKHYGIYACDGCAGFFKRSIRRSRQYVCKSQKQGLCVVDKTHRNQCRACRLRKCFE 98
            |:||.|.|||||||||||:||:||||||:||...|.|: ...|:|.|||.|||||:||||:||.:
  Rat    40 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQ-VGAGMCPVDKAHRNQCQACRLKKCLQ 103

  Fly    99 VGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPMPMPGLPQ 163
            .|||:||||:||.||:      :|......|..|..|:                  |.|:...|.
  Rat   104 AGMNQDAVQNERQPRS------LAQVHLESMEPGSDPR------------------PEPVVASPA 144

  Fly   164 RAGHHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFS-----------PTAAYMNALAT 217
            .||..|      :.|.|.:|...:            |||...|           |..|..|...|
  Rat   145 LAGPSP------RGPTSVSAARAM------------GHHFMASLISAETCAKLEPEDAEENIDVT 191

  Fly   218 RALP--PTPPLMAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQY 280
            ...|  |..| ...:.|.||:|..||..|.|.|::..|:.||..||::||||:|.|.|:|...|:
  Rat   192 SNDPEFPASP-CNLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWNELFLLGAIQW 255

  Fly   281 LMPMNFAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKSPPS 345
            .:|::...||...|:.::::..:.:.:.|:...||.:::...|.:|.||:.||:|:.||:
  Rat   256 SLPLDSCPLLAPPEASSSSQGRLALASAEMRFLQETISRFRALAVDPTEFACLKALVLFK----- 315

  Fly   346 ASSTEDLANSSILTGSGSPNSSASAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTL 410
                                    .|:|||.:...|.|:.:.::..|..:.:..|||||:||..|
  Rat   316 ------------------------PETRGLKDPDHVEALQDQSQVMLSQHSKAHHPSQPVRFGKL 356

  Fly   411 LGVVQLMHKVSSFTIEELFFRKTIGDITIVRLISDMY 447
            |.::..:..:::..||.||||||||:..:.:|:.||:
  Rat   357 LLLLPSLRFITAERIELLFFRKTIGNTPMEKLLCDMF 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tll	NP_524596.1	NR_DBD_TLX	25..117	CDD:143537	54/82 (66%)
		NR_LBD	215..436	CDD:416257	68/222 (31%)
Nr2e3	XP_038938356.1	NR_DBD_PNR	32..123	CDD:143528	55/89 (62%)
		NR_LBD_Tlx_PNR_like	185..382	CDD:132748	69/226 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D373206at33208
OrthoFinder	1	1.000	-	-		FOG0001683
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X118
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920