DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and AT4G34660

DIOPT Version :9

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_567969.1 Gene:AT4G34660 / 829618 AraportID:AT4G34660 Length:368 Species:Arabidopsis thaliana


Alignment Length:379 Identity:74/379 - (19%)
Similarity:120/379 - (31%) Gaps:114/379 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AAKEPDELDLQKGAIIHRIKQMPGGWWQGTLKASG------------VTGMFPDNFVRVLESGVS 66
            |::..:::..|:.|:   .||..||.:...|....            ::.....::.|.:..|| 
plant     8 ASRLREQVARQQQAV---FKQFGGGGYGSGLADEAELNQHQKLEKLYISTRAAKHYQRDIVRGV- 68

  Fly    67 SNGNGTTGSGDHIEVGTAVQLRDKSATSNRRCKVIYSYTQVNDDELTLAVGDVIEFLGEVEEGWW 131
             .|...||| ..:|:||.:....:...|...|        .|.:.||.|..:......::|:.  
plant    69 -EGYIVTGS-KQVEIGTKLSEDSRKYGSENTC--------TNGNVLTRAALNYGRARAQMEKE-- 121

  Fly   132 RGRLRSKVGVFPSNFVQHIEPSPVLASKRPPTIGATVTTS------------ALTSKAANVANVA 184
            ||.:...:|      .|..||      .|...:||.:..:            ...::|..||...
plant   122 RGNMLKALG------TQVAEP------LRAMVLGAPLEDARHLAQRYDRMRQEAEAQATEVARRQ 174

  Fly   185 ATATVPTGGAVPPASTSISTSTTK-QATKSRAT----AAAAASAPAE------------------ 226
            |.|....|.  |.....:.::..| ...||..|    .||:|.|..|                  
plant   175 AKARESQGN--PDILMKLESAEAKLHDLKSNMTILGKEAASALASVEDQQQKLTLERLLSMVESE 237

  Fly   227 --------------PAAIVSGSGAAAGGGAAAAVPMLPPKPQRE--------------------- 256
                          ...:||...........::...:||.|..|                     
plant   238 RAYHQRVLQILDQLEGEMVSERQRIEAPSTPSSADSMPPPPSYEEANGVFASQMHDTSTDSMGYF 302

  Fly   257 FCRVEFPYAPQNDDELELKVDDIIAVISTELPDKGWWKGEIRGKVGVFPDNFVK 310
            ...|.|||....|.||.|...:.:.|  .::...||.:||.:||.|.||..:::
plant   303 LGEVLFPYHGVTDVELSLSTGEYVVV--RKVTGSGWAEGECKGKAGWFPYGYIE 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806 8/57 (14%)
SH3_CD2AP-like_2 97..149 CDD:212807 9/51 (18%)
SH3_CD2AP-like_3 258..310 CDD:212808 18/51 (35%)
AT4G34660NP_567969.1 BAR_SH3P_plant 45..254 CDD:153291 42/235 (18%)
SH3 303..354 CDD:418401 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14167
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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