DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and sorbs3

DIOPT Version :10

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001417908.1 Gene:sorbs3 / 541478 ZFINID:ZDB-GENE-050327-1 Length:695 Species:Danio rerio


Alignment Length:372 Identity:80/372 - (21%)
Similarity:136/372 - (36%) Gaps:99/372 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AIVEYEYAAKEPDELDLQKGAIIHRIKQMPGGWWQGTLKASGVTGMFPDNFVRVLESGVSSNGNG 71
            |..::.:.|:.|.||.:|||.:::..:|:...|::|  :..|..|:||.::|.::..        
Zfish   351 ARAKFNFQAQSPKELTIQKGDVVYIHRQIDANWYEG--EHHGRVGIFPTSYVEIIPP-------- 405

  Fly    72 TTGSGDHIEVGTAVQLRDKSATSNRRCKVIYSYTQVNDDELTLAVGDVIEFLGEVEEGWWRGRL- 135
                   .|..|.::..............:|::......||:...|:||.....|::.|..||: 
Zfish   406 -------TEKPTPIKSPTIQVLEYGEAAALYTFNADLPVELSFRKGEVISITRRVDDHWLEGRIA 463

  Fly   136 -RSKVGVFPSNFV------------------------------QHIEPSPVLASKRP-------- 161
             .::.|:||.::|                              ||...||:..|..|        
Zfish   464 GTTRSGIFPISYVQVNKMPRTKSSDDFPSSPTLTPEPLSPGRPQHSPLSPLSRSPEPQLSHHKQS 528

  Fly   162 -----------------PT------IGATVTTSALTSKAANVANVAATATVPTGGAVPPASTSIS 203
                             ||      .|.|.:||. |||...:.::..|....:...|.|:|..:.
Zfish   529 SQSRSPLSHAQATSPKQPTNHFLFSPGPTSSTSP-TSKRTGLMHLHNTPETDSRSPVSPSSHVLQ 592

  Fly   204 TSTTKQATKSRA----TAAAAASAPAEPAAIVSGSGAAAGGGAAAAVPMLPPKPQREFCRVEFPY 264
            :..........|    |...|.:..::|..::|.:..:.........|.          :..:.|
Zfish   593 SLQGPGLPAKHASPYITQDVARTQSSQPNTVISSTSQSPANMGHLRQPY----------KAVYNY 647

  Fly   265 APQNDDELELKVDDIIAVISTELPDKGWWKG--EIRGKVGVFPDNFV 309
            .|||.|||||:..||:.|:  |..|.||:.|  |.....|.||.|:|
Zfish   648 KPQNRDELELREGDIVQVL--EKCDDGWFVGTSERTEAFGTFPGNYV 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806 16/52 (31%)
SH3_CD2AP-like_2 97..149 CDD:212807 14/83 (17%)
SH3_CD2AP-like_3 258..310 CDD:212808 23/54 (43%)
sorbs3NP_001417908.1 Sorb 117..165 CDD:470634
SH3_Vinexin_1 349..403 CDD:212854 16/53 (30%)
SH3_Sorbs_2 424..478 CDD:212716 14/53 (26%)
PHA03269 472..>589 CDD:165527 20/117 (17%)
SH3_Vinexin_3 638..695 CDD:212851 24/67 (36%)
Blue background indicates that the domain is not in the aligned region.

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