DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and Nostrin

DIOPT Version :10

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_853525.3 Gene:Nostrin / 329416 MGIID:3606242 Length:506 Species:Mus musculus


Alignment Length:108 Identity:35/108 - (32%)
Similarity:48/108 - (44%) Gaps:18/108 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ESGVSSNGNGTTGSGDHIEVGTAVQLRDKSATSNRRCKVIYSYTQVNDDELTLAVGDVIEFLGEV 126
            ||...:.|.....|...   |:.|     |..|...||.:|::....||||.|..||::....:.
Mouse   415 ESKAPAGGQNNPSSSPS---GSTV-----SQASKHLCKALYTFQARQDDELNLEKGDIVTVHEKK 471

  Fly   127 EEGWWRGRLRSKVGVFPSNFVQHIEPSPVLASKRPPTIGATVT 169
            |||||.|.|:.|.|.||:.:|:.:          ||..|.|.|
Mouse   472 EEGWWFGSLKGKRGHFPAAYVEEL----------PPKAGNTAT 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806
SH3_CD2AP-like_2 97..149 CDD:212807 22/51 (43%)
SH3_CD2AP-like_3 258..310 CDD:212808
NostrinNP_853525.3 F-BAR_NOSTRIN 8..250 CDD:153342
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..435 5/22 (23%)
SH3_Nostrin 443..494 CDD:212757 22/50 (44%)
Blue background indicates that the domain is not in the aligned region.

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