DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and Cd2ap

DIOPT Version :10

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_852140.2 Gene:Cd2ap / 316258 RGDID:727803 Length:637 Species:Rattus norvegicus


Alignment Length:588 Identity:152/588 - (25%)
Similarity:231/588 - (39%) Gaps:123/588 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVEYEYAAKEPDELDLQKGAIIHRIKQM-PGGWWQGTLKASGVTGMFPDNFVRVLE--------- 62
            ||||:|.|...|||.::.|.||..:|:: ..||.:|.|  :|..||||||||:.::         
  Rat     5 IVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGEL--NGRRGMFPDNFVKEIKRETEPKDDN 67

  Fly    63 ---------------SGVSSNGNGTTGSGDHIEVGTAVQLRDKSATSNRRCKVIYSYTQVNDDEL 112
                           ..:|:.|....|...|.:....     |..|..|:|||::.|:..|:|||
  Rat    68 LPIKRERPGNVASLVQRISTYGLPAGGIQPHPQTKAM-----KKKTKKRQCKVLFEYSPQNEDEL 127

  Fly   113 TLAVGDVIEFLGEVEEGWWRGRLRSKVGVFPSNFVQHIEPS---PVLASKRPPTIGATVTTSALT 174
            .|.|||||:.:.|||||||.|.|.:|:|:||||||:.:|.:   .:..::....:..|..||.:.
  Rat   128 ELTVGDVIDVIEEVEEGWWSGTLNNKLGLFPSNFVKELESTDDGEMHDAQEESEVSLTGPTSPMP 192

  Fly   175 SKAANVANVAATATVPT-------GGAVPPASTSISTSTTKQATKSRATAAAAASAPAEPAAIVS 232
            |..........:.|.|.       |......|..:.|.|:...|:.:         .:|...|:.
  Rat   193 SPGNGSEPAPGSVTQPKKIRGVGFGDIFKEGSVKLRTRTSSSETEEK---------KSEKPLILQ 248

  Fly   233 GSGAAAGGGAAAAVPMLPPK-PQREFCRVEFPYAPQNDDELELKVDDIIAVISTELPDKGWWKGE 296
            ..|:.. .......|.:..| ..:|:|:..|||...|:|||..:..:||.:||.|..:.||||||
  Rat   249 SLGSRT-QNVEVTKPDIDGKIKAKEYCKTVFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGE 312

  Fly   297 IRGKVGVFPDNFVKMLA------PSEATAAPPLPRPRPRTRPGMG-------------------- 335
            :.||.|||||||...::      |......||...|.|:..|..|                    
  Rat   313 LNGKEGVFPDNFAVQISELDKDFPKPKKPPPPAKGPAPKPDPLAGEKKTFPLKAEDRDEKSLLEQ 377

  Fly   336 --------------GTGAGSGSGII--DGVRTPRRTQRGGSFEFLGARMASFITTIFAPIN-EPP 383
                          .|.....:.::  .|...|:|.::........|::...::||.:.|: ||.
  Rat   378 KPSKPAAPQVPPKKPTPPTKANNLLRSPGTMYPKRPEKPVPPPPPTAKINGEVSTISSKIDTEPL 442

  Fly   384 SATQITQNQRKVSNTASTTSHMTTTNSSNSSTTSVTTQQQKEQI--------------------G 428
            |..::...|..|...:.....:...||..:...:.......|.:                    |
  Rat   443 SKPKLDPEQLPVRPKSVDLDALVARNSKETDNVNFDDIASSENLLHLTANRPKMPGRRLPGRFNG 507

  Fly   429 GSSSTTSKVYIKKTGSSSNSTTSSTTTASSSAGRKESFGSRDSLNDILSETGLPTGNVAAQRKSL 493
            |.|.|.|.....|.....:|.....:.....||    :.|:.||:...|.:.:   |.||....|
  Rat   508 GHSPTQSPEKTLKLPKDDDSGNIKPSEFKKDAG----YSSKPSLSAPSSASKV---NTAAFLSPL 565

  Fly   494 ENK 496
            |.|
  Rat   566 ELK 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806 26/52 (50%)
SH3_CD2AP-like_2 97..149 CDD:212807 31/51 (61%)
SH3_CD2AP-like_3 258..310 CDD:212808 28/51 (55%)
Cd2apNP_852140.2 Interaction with ANLN and localization to the midbody. /evidence=ECO:0000250 1..175 65/176 (37%)
SH3_CD2AP_1 3..58 CDD:212986 26/54 (48%)
SH3_CD2AP_2 111..165 CDD:212987 32/53 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..211 6/43 (14%)
SH3_CD2AP_3 271..327 CDD:212989 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..455 19/121 (16%)
SH3-binding. /evidence=ECO:0000255 336..352 5/15 (33%)
SH3-binding. /evidence=ECO:0000255 378..397 1/18 (6%)
SH3-binding. /evidence=ECO:0000255 410..422 2/11 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 488..556 13/71 (18%)

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