DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and SPBC800.10c

DIOPT Version :9

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_595112.1 Gene:SPBC800.10c / 2540824 PomBaseID:SPBC800.10c Length:1116 Species:Schizosaccharomyces pombe


Alignment Length:974 Identity:191/974 - (19%)
Similarity:321/974 - (32%) Gaps:305/974 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VTGMFPDNFVRVLESGVSSNGNGTTGSGDHIEVGTAVQLRDKSATSNRRCKVIYSYTQVNDDELT 113
            ::|:....||::......|:|:|:.||                           ....::.||:|
pombe    99 ISGVDSSKFVQLNRPNNVSSGDGSDGS---------------------------FLPPISSDEMT 136

  Fly   114 --------------LAVGD-----------VIEFLGEVEEGWWR---GRLRSKVGVFPSNFVQHI 150
                          |..||           ..|.|..|    |.   ...|..:.:...|...||
pombe   137 RYQQMFTTVCPTDGLMDGDRASSIFGRAPLSTEILARV----WNLVDTHKRGALDIREFNTGMHI 197

  Fly   151 EPSPVLASKRPPTIGATVTTSALTSKAANVANVAATATVPTGGAVPPASTSISTSTTKQATKSRA 215
            ....:..|.:.|.:  :::.|.:.| ||:.::|:|.:..|.....||..                
pombe   198 INLLLNGSLKSPPV--SISPSFIAS-AASTSSVSAPSQYPGLSRSPPVQ---------------- 243

  Fly   216 TAAAAASAP-AEPAAIVSGSGAAAGGGAAAAVPMLPPKPQREFCRV------------------E 261
                |.:.| ::|.||                   |.:....||::                  .
pombe   244 ----APNIPVSDPWAI-------------------PSQDLTSFCQLFSNVDKAHKGYVSGSEAYS 285

  Fly   262 FPYAPQNDDELELKVDDIIAVISTELPDKGWW-------KGEIRGK--VGVFPDNFVKMLAP--- 314
            |..|.:..:::..::.|:....|....:.|.:       |.::.||  ..|.|.:.:..:||   
pombe   286 FFLASKLPEDVLAQIWDLSDTNSNGKLNIGEFCISLYLIKLKLSGKELPKVLPSSMLSSVAPLMQ 350

  Fly   315 ---SEATAAPPL-------PRPRPRTRPGMGGTGAGSGSGIIDGVRTPRRTQRGGSFEFLGARMA 369
               |..|:.|.:       |.|.|...|...|               |.|...|..      .:.
pombe   351 KSKSVPTSIPSVVPANISSPNPNPTLAPNPTG---------------PSRVTSGTE------DLL 394

  Fly   370 SFITTIFAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSNSSTTSVTTQQQKEQIGGSSSTT 434
            |...|.|:|...|         |...||   .|.|.....:.::....|:..|.....|..:|..
pombe   395 SLDATPFSPTLAP---------QHTSSN---ATKHSAPPVTKSAPFPVVSPLQLNHTPGFPTSPA 447

  Fly   435 SKVYIKKTGSSSNSTTSSTTTASSSAGRKESFGSRDSLNDILSETGLPTGNVAA---QRKSLENK 496
            :|         .||.| ||....||.|:..:..:.|..:.:  .|.:|: .:||   |..|.|..
pombe   448 AK---------PNSPT-STFFPQSSFGQTIAKNTMDKPSAV--RTSVPS-QLAAPIPQVASAEQL 499

  Fly   497 NLDLTKPPGVGASVSIGQQRSSTSSATTSSATTVATGLTSSSVSKS-MENMLDEKVKSPPPPVLS 560
            .| ..:.|.:.:.:|   |...::.....|:..||..|:......| :....||:        |:
pombe   500 KL-AAEVPKLESQLS---QVKKSNDDLQKSSRDVAANLSDVKAKVSEIRKAYDEE--------LA 552

  Fly   561 KKPSVPL----KKTPTGGVPMTGNLLGG------KKKNTEGKLTTAVSHDLADGLAASKMLSGAN 615
            |...:.|    .|..|..|....::|..      |:...:|::...|   :|:..||..|:..:|
pombe   553 KAKQISLDIETNKAQTEQVNREYSILEATLNALQKQNKQKGEVLEQV---VAESEAAKNMVESSN 614

  Fly   616 ----QLPESGAAGNVVIRRAATIAVEDTDFDRVERASILTDMRQGRVKAPKRRPPSAAINVLGES 676
                ||...      |..:..|:|......|.:.:..:..|...   ||..:|.......:    
pombe   615 ASIQQLKSE------VADKEQTLAQLHLQLDEMTQRLVSLDEES---KAVSQRKLDLEYKI---- 666

  Fly   677 NNNSVYVNGSGMSGSGGAGSASELSEDGGAGGKTSDDNSTGEEPQLAKPKPREWEKKKAPWMEE- 740
             |||                            ||  ..:|..|......|..|.||::...:|: 
pombe   667 -NNS----------------------------KT--QLATATEEYHEHSKQLEAEKQELSKLEDG 700

  Fly   741 LKASQVTRKKTSPSVE--PRGASVAERTSKLFAAEQAVSSNSSSITTKVQSSAVTSSMFVENSTT 803
            ||:..:|.:...|.|:  ||..|..  ::.:...:..:...:||:.|:..|.....:.....|..
pombe   701 LKSVNLTEEAPKPEVDSTPRFPSFT--SNGITTDKPTLPDTTSSVPTQHNSFDAMHNTLRSPSLN 763

  Fly   804 SSSVITSSSHTTTNDAIMSRS-LSAAKVQTASS-------DEETRATRPNSLAIRNQRSVSPLVK 860
            |::   ||:|.:|    :||: ....|:..|||       .|...|..|.|::.....||     
pombe   764 SNN---SSAHAST----VSRNPFHNLKISGASSPVSNFWESEFASAVFPRSISKTTSLSV----- 816

  Fly   861 SSNASSSQSQEEKPTSQLNN-----HQDAS--------SSRVAQLEQRVDKLEGLVLNQQRTIE 911
             :|:|.:.|.:.:|. ||:|     |||:|        |.|.:.:...:.||.|...|....:|
pombe   817 -NNSSVNPSLDSEPV-QLSNMEEPQHQDSSVVDVSTSASQRGSPVLSDLSKLTGSARNTAEPVE 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806 3/10 (30%)
SH3_CD2AP-like_2 97..149 CDD:212807 12/79 (15%)
SH3_CD2AP-like_3 258..310 CDD:212808 11/78 (14%)
SPBC800.10cNP_595112.1 EH 13..79 CDD:238009
EH 138..203 CDD:238009 11/68 (16%)
EH 252..345 CDD:197477 16/111 (14%)
EH 263..329 CDD:238009 8/65 (12%)
KASH_CCD 493..701 CDD:291334 50/266 (19%)
BAR 499..704 CDD:299863 50/263 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9305
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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