DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and B0303.7

DIOPT Version :10

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_498918.3 Gene:B0303.7 / 176220 WormBaseID:WBGene00015128 Length:493 Species:Caenorhabditis elegans


Alignment Length:393 Identity:89/393 - (22%)
Similarity:152/393 - (38%) Gaps:83/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GVSSNGNGTTGSGDHIEVGT--------------AVQLRDKSATSNRRCKVIYSYTQVNDDELTL 114
            |.|.|.||.   .::|:..|              ..::|:.:..:.:...|..:...|..||  .
 Worm    17 GTSGNSNGI---NENIDTSTFSVSAAKALFESAKRPEVRNAAIAAAKNPFVRQTAKNVAQDE--K 76

  Fly   115 AVGDVIEFLGEVEEGWWRGRLRSKVGVFPSNFVQHIEPSPVLASKRPPTIGATV------TTSAL 173
            |.|.|:..:.:...|   .::.:...|..:|......|.|      ||..|.|.      :.||:
 Worm    77 ARGAVLNAVKDPSGG---NKISAAFAVADANRKSDSVPPP------PPHRGGTSPGKLSGSHSAI 132

  Fly   174 TSKAANVANVAATATVPTGGAVPPASTSISTSTTKQATKSRATAAAAASAPAEPAAIVSGSGAAA 238
            .|:..|         :..||:|    .|.::||...:.:|.:|::.::|||..|..:...:.:..
 Worm   133 RSQLEN---------MHIGGSV----MSSNSSTATPSYQSNSTSSYSSSAPVAPPPVPRHTQSIP 184

  Fly   239 GGGAAAAVPMLPPKPQREFCRVEFPYAPQNDDELELKVDDIIAVISTELPDKGWWKGEIRGK--V 301
            ...|        |.....:...:|.|||...||:.|::.|.: :||.:: |..|:.||.:.:  .
 Worm   185 SYSA--------PAISTPYGIAKFDYAPTQSDEMGLRIGDTV-LISKKV-DAEWFYGENQNQRTF 239

  Fly   302 GVFPDNFVKMLAP-SEA-TAAPPLPRPRPRTRPGMGGTG--------AGS-----GSGIIDGVRT 351
            |:.|.:::.:..| .|| ||.||.|.....:..|...|.        ||.     ||.|:...|.
 Worm   240 GIVPSSYLDIKIPLKEAFTALPPRPAAPSGSSSGTYATAIYDYNSNEAGDLNFAVGSQIMVTARV 304

  Fly   352 PRRTQRGGSFEFLGARMASFITTIFAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSNSSTT 416
            ......|..|...|...:.|:        :.|:..|:...| ...::|.:.||..|.||....|.
 Worm   305 NEEWLEGECFGRSGIFPSQFV--------DCPNLYQVPMKQ-SAPSSAPSYSHPITNNSGPKQTV 360

  Fly   417 SVT 419
            :|:
 Worm   361 TVS 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806
SH3_CD2AP-like_2 97..149 CDD:212807 10/51 (20%)
SH3_CD2AP-like_3 258..310 CDD:212808 16/53 (30%)
B0303.7NP_498918.3 SH3 194..247 CDD:214620 16/54 (30%)
SH3 275..326 CDD:473055 11/58 (19%)
SH3 356..409 CDD:214620 2/8 (25%)
SH3 432..490 CDD:214620
Blue background indicates that the domain is not in the aligned region.

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