DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and cdap-2

DIOPT Version :9

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_491143.3 Gene:cdap-2 / 171906 WormBaseID:WBGene00021549 Length:551 Species:Caenorhabditis elegans


Alignment Length:815 Identity:181/815 - (22%)
Similarity:278/815 - (34%) Gaps:338/815 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 YSYTQVNDDELTLAVGDVIEFLGEVEEGWWRGRLRS--KVGVFPSNFVQHIEPSPVLASKRPPTI 164
            |:|:...||||:..|||:||.:.:||:||.:|:|:|  .||:||:|||. ::|:|          
 Worm    55 YAYSSKQDDELSFVVGDLIELISDVEDGWSKGKLKSTGAVGMFPTNFVT-LKPTP---------- 108

  Fly   165 GATVTTSALTSKAANVANVAATATVPTGGAVPPASTSISTSTTKQATKSRATAAAAASAPAEPAA 229
                     ::.||.|| .||:|:...|.|....:.||.:....: ::.:|.....::..::||.
 Worm   109 ---------STSAAAVA-PAASASTSAGSAARTPAKSIGSEVVMR-SEPKAIDRTPSTIISDPAP 162

  Fly   230 IVSG-----SGAAAGGGAAAAVPMLPPKPQREFCRVEFPYAPQNDDELELK-VDDIIAVISTELP 288
            ::..     |...|...|:|:......| .:|..||:|.|.||:||||.|| :|.:|.:.:....
 Worm   163 VLKALETKFSSTFASSAASASTDAETTK-TKEMARVKFVYNPQHDDELALKEIDMLINITNKNCG 226

  Fly   289 DKGWWKGEIRGKVGVFPDNFVKMLAPSEATAAPPLPRPRPRTRPGMGGTGAGSGSGIIDGVRTPR 353
            |.||::||:.||.|:||||||:::       ..||            ||.:|:..|.|....|  
 Worm   227 DAGWFEGELHGKKGLFPDNFVELV-------QVPL------------GTESGARHGSISRQAT-- 270

  Fly   354 RTQRGGSFEFLGARMASFITTIFAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSNSSTTSV 418
                           .:|::....|:|.|..|  :.....|:|......|  |...::.|:....
 Worm   271 ---------------LTFVSHKPPPVNPPQPA--VPPKPAKISVADPPPS--TIAPAAPSAPAPA 316

  Fly   419 TTQQQKEQIGGSSSTTSKVYIKKTGSSSNSTTSSTT---TASSSAGRKESFGSRDSLNDILSETG 480
            .:|                        .|.|::|.|   .|.||:..|.:|              
 Worm   317 PSQ------------------------LNPTSTSPTMPAIAPSSSALKSNF-------------- 343

  Fly   481 LPTGNVAAQRKSLENKNLDLTKPPGVGASVSIGQQ--RSSTSSATTSSATTVATGLTSSSVSKSM 543
                 .|.|.|.  ::||.:..|..| ||:....|  ||||..:||                   
 Worm   344 -----AALQEKM--SRNLKVVAPEKV-ASIQKPDQRDRSSTGESTT------------------- 381

  Fly   544 ENMLDEKVKSPPPPVLSKKPSVPLKKTPTGGVPMTGNLLGGKKKNTEGKLTTAVSHDLADGLAAS 608
                                          |.|...|                            
 Worm   382 ------------------------------GEPSIDN---------------------------- 388

  Fly   609 KMLSGANQLPESGAAGNVVIRRAATIAVEDTDFDRVERASILTDMRQGRVKAPKRRPPSAAINVL 673
               |..:|:.|                              |..:.:.|.:.||.||.|..:|  
 Worm   389 ---SATDQVAE------------------------------LQHITKNRARPPKNRPMSMVMN-- 418

  Fly   674 GESNNNSVYVNGSGMSGSGGAGSASELSEDGGAGGKTSDDNSTGEEPQLAKPKPREWEKKKAPWM 738
                                             ..::||::..|   :|:.|             
 Worm   419 ---------------------------------RNRSSDESPNG---RLSSP------------- 434

  Fly   739 EELKASQVTRKKTSPS-VEPRGASV-AERTSKLFAAEQAVSSNSSSITTKVQSSAVTSSMFVENS 801
                        ||.| |.|..||: ...|:|    |.::.||||:          |||.|    
 Worm   435 ------------TSISTVNPMSASMFVPATAK----EISIPSNSSA----------TSSPF---- 469

  Fly   802 TTSSSVITSSSHTTTNDAIMSRSLSAAKVQTASSDEETRATRPNSLAIRNQRSVSPLVKSSNASS 866
             .|||:...||                     :|....|....||||..:..|.|.:.|.::..|
 Worm   470 -KSSSIAPPSS---------------------ASKPALRPIPSNSLADDSTSSTSAIRKLASPDS 512

  Fly   867 SQSQEEKPTSQLNNHQ-DASSSRVAQLEQRVDKLE 900
            .:|....|:..::..: ||...|...||.||..:|
 Worm   513 QKSPNLPPSDYVSRAEYDALLDRFRALESRVLAIE 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806
SH3_CD2AP-like_2 97..149 CDD:212807 25/48 (52%)
SH3_CD2AP-like_3 258..310 CDD:212808 27/52 (52%)
cdap-2NP_491143.3 SH3 53..104 CDD:302595 25/49 (51%)
SH3 194..249 CDD:302595 28/54 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167632
Domainoid 1 1.000 59 1.000 Domainoid score I7088
eggNOG 1 0.900 - - E1_KOG4348
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I3359
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1577081at2759
OrthoFinder 1 1.000 - - FOG0002275
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14167
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5319
SonicParanoid 1 1.000 - - X1165
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.890

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