DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cindr and NOSTRIN

DIOPT Version :10

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001165102.1 Gene:NOSTRIN / 115677 HGNCID:20203 Length:563 Species:Homo sapiens


Alignment Length:116 Identity:40/116 - (34%)
Similarity:52/116 - (44%) Gaps:24/116 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 DNFVRVLESGVSSN-GNGTTGSGDHIEVGTAVQLRDKSATSNRRCKVIYSYTQVNDDELTLAVGD 118
            :|.|....||..|| |:.|...|       |.||      |:|.||.:||:....||||.|..||
Human   469 ENIVSKASSGGQSNPGSSTPAPG-------AAQL------SSRLCKALYSFQARQDDELNLEKGD 520

  Fly   119 VIEFLGEVEEGWWRGRLRSKVGVFPSNFVQHIEPSPVLASKRPPTIGATVT 169
            ::....:.|.|||.|.|..|.|.||:.:|:.:          |...|.|.|
Human   521 IVIIHEKKEGGWWFGSLNGKKGHFPAAYVEEL----------PSNAGNTAT 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806 2/4 (50%)
SH3_CD2AP-like_2 97..149 CDD:212807 22/51 (43%)
SH3_CD2AP-like_3 258..310 CDD:212808
NOSTRINNP_001165102.1 BAR 8..307 CDD:472257
HR1 353..431 CDD:469609
SH3_Nostrin 500..551 CDD:212757 22/50 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.