DRSC/TRiP Functional Genomics Resources

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Protein Alignment cindr and nostrin

DIOPT Version :10

Sequence 1:NP_001263129.1 Gene:cindr / 43654 FlyBaseID:FBgn0027598 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_001107076.2 Gene:nostrin / 100148449 ZFINID:ZDB-GENE-070522-2 Length:537 Species:Danio rerio


Alignment Length:116 Identity:38/116 - (32%)
Similarity:54/116 - (46%) Gaps:21/116 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TGMFPDNFVRVLESGVSSNG--NG-TTGSGDHIEVGTAVQLRDKSA--TSNRRCKVIYSYTQVND 109
            ||..|      |....:|:|  || ..||....|       .||.|  ....|||.:||:....:
Zfish   434 TGENP------LNEATNSDGQKNGPVNGSVSEYE-------DDKGAELCCIGRCKALYSFASDRE 485

  Fly   110 DELTLAVGDVIEFLGEVEEGWWRGRLRSKVGVFPSNFVQHIEPSPVLASKR 160
            |||.:..|||:|...:.:.|||.|.|..:.|:|||.:|:.:   ||..:.:
Zfish   486 DELNINEGDVLEIFEKDDTGWWFGELNGQRGLFPSTYVEEL---PVFTAMK 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cindrNP_001263129.1 SH3_CD2AP-like_1 6..60 CDD:212806 3/9 (33%)
SH3_CD2AP-like_2 97..149 CDD:212807 22/51 (43%)
SH3_CD2AP-like_3 258..310 CDD:212808
nostrinNP_001107076.2 None
Blue background indicates that the domain is not in the aligned region.

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