DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dj-1beta and YLS5

DIOPT Version :10

Sequence 1:NP_651825.4 Gene:dj-1beta / 43652 FlyBaseID:FBgn0039802 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_850303.1 Gene:YLS5 / 818470 AraportID:AT2G38860 Length:398 Species:Arabidopsis thaliana


Alignment Length:206 Identity:53/206 - (25%)
Similarity:81/206 - (39%) Gaps:31/206 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLN---GGEAVKCSRDV------------Q 50
            :.||||::.....|..|.|:...||:..|:.|.....|   |...|..:.|.            |
plant     5 VQKSALLLCGDYMEAYETIVPLYVLQSFGVSVHCVSPNRNAGDRCVMSAHDFLGLELYTELVVDQ 69

  Fly    51 ILPDTSLAQVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAKHGV 115
            :..:.:...|..:.:||:::|||........:...|..:.|..|| ..||...|.:..:|...|:
plant    70 LTLNANFDDVTPENYDVIIIPGGRFTELLSADEKCVDLVARFAES-KKLIFTSCHSQVMLMAAGI 133

  Fly   116 -ASGKSLTSYPSMKP----------QLVNNYSYVDDKTVVKDGNLITSRGPGTAYEFALKIAEEL 169
             |.|...|::.|:||          |.....|..:....|||||.:::.|..|.......:.|.|
plant   134 LAGGVKCTAFESIKPLIELSGGEWWQQPGIQSMFEITDCVKDGNFMSTVGWPTLGHGIKLLLESL 198

  Fly   170 AGK----EKVQ 176
            .||    ||.|
plant   199 GGKVCSLEKKQ 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dj-1betaNP_651825.4 not_thiJ 4..181 CDD:213612 52/203 (26%)
YLS5NP_850303.1 GATase1_PfpI_1 10..198 CDD:153243 44/188 (23%)
GATase1_PfpI_1 211..392 CDD:153243
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.