DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and Pdpk1

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_112343.2 Gene:Pdpk1 / 81745 RGDID:620307 Length:559 Species:Rattus norvegicus


Alignment Length:561 Identity:143/561 - (25%)
Similarity:235/561 - (41%) Gaps:165/561 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   570 IQISNSNLATTPPIPP--AKYNNNSSNTGANSSGGSNGST--GTTASSSTSCKKI-KHASPIPER 629
            :.|.:|.:..:.|.|.  ......||:.|..|.....|||  ||||.:..|...: :|.:.:|.:
  Rat    12 VPIQSSVVLCSCPSPSMVRSQTEPSSSPGIPSGVSRQGSTMDGTTAEARPSTNPLQQHPAQLPPQ 76

  Fly   630 KKISKEKEEERKEFRIRQYSPQAFKFFMEQHIENVIKSYRQRTYRKNQLEKEMHKVGLPDQTQIE 694
            .               |:..|:.|||.                                      
  Rat    77 P---------------RKKRPEDFKFG-------------------------------------- 88

  Fly   695 MRKMLNQKESNYIRLKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTLRKADVLKR 759
                                        |.:|.|:|..|.|..::.||.. ||:|.|.|..::|.
  Rat    89 ----------------------------KILGEGSFSTVVLARELATSRE-YAIKILEKRHIIKE 124

  Fly   760 NQVAHVKAERDILAEADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFEEELARFYI 824
            |:|.:|..|||:::..|:.:.||||::|||.:.|||.:.|...|:|:..:.|:|.|:|...|||.
  Rat   125 NKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 189

  Fly   825 AEVTCAVDSVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQENGNHSRQDSM 889
            ||:..|::.:|..|.||||:||:|||::.|.||::||||..                     ..:
  Rat   190 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA---------------------KVL 233

  Fly   890 EPWEEYSENGPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLERSGYTQLCDYWSVGVILYEM 954
            .|                    |.::..|:|.|||..|::||:|......:..|.|::|.|:|::
  Rat   234 SP--------------------DSKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 278

  Fly   955 LVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIRRLCA-SADKRLG----KSVDEV 1014
            :.|.|||.|.:.....||:|..|...   |: :...:|.||:.:|.. .|.||||    :....:
  Rat   279 VAGLPPFRAGNEYLIFQKIIKLEYDF---PE-KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 339

  Fly  1015 KSHDFFKGIDFADMRKQKAP----YIPEIKHPTDT--SNFDPVDPE----KLRSNDSTMS----- 1064
            |:|.||:.|.:.::.:|..|    |:|.:....:.  .|:|.:..:    ::.|:.|:.|     
  Rat   340 KAHPFFESITWENLHQQTPPKLTAYLPAMSEDDEDCYGNYDNLLSQFGCMQVSSSSSSHSLSAVD 404

  Fly  1065 ------SGDDVDQ--NDRTFHGF-----FEFTFRRFFDDKQ 1092
                  ||.:::|  :|...:.|     |....:|...:||
  Rat   405 ASLPQRSGSNIEQYIHDLDTNSFELDLQFSEDEKRLLLEKQ 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 115/388 (30%)
S_TKc 719..1020 CDD:214567 99/305 (32%)
Pdpk1NP_112343.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..83 16/72 (22%)
STKc_PDK1 83..345 CDD:270733 102/373 (27%)
PIF-pocket. /evidence=ECO:0000250|UniProtKB:O15530 116..160 18/43 (42%)
PH_PDK1 444..550 CDD:241293 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.