DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and AT2G20470

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_001318254.1 Gene:AT2G20470 / 816567 AraportID:AT2G20470 Length:569 Species:Arabidopsis thaliana


Alignment Length:544 Identity:204/544 - (37%)
Similarity:307/544 - (56%) Gaps:91/544 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   586 AKYNNNSSNTGANSSGGSNGS-------TGTTASSSTSCKKIKHASPIPERKKISKEKEEERKEF 643
            ::|...|...|   .||||||       |...|.|:|:.:|:                       
plant    17 SRYKGASGGAG---GGGSNGSADEHNVETDEEAVSNTTKQKV----------------------- 55

  Fly   644 RIRQYSPQAFKFFMEQHIENVIKSYRQRTYRKNQLEKEMHKVGLPDQTQIEMRKMLNQKESNYIR 708
                   .|.|.::|.|.:..:|..::|..|::.||:::....:.::.|..:.|.|.:||:.|:|
plant    56 -------AAAKQYIENHYKEQMKILQERKERRSMLEQKLADADVSEEDQNNLLKFLEKKETEYMR 113

  Fly   709 LKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTLRKADVLKRNQVAHVKAERDILA 773
            |:|.|:..:.|..|..||.||||||. |.:..|:..:||||.|:||::|:|.||.||:|||::||
plant   114 LQRHKLGVADFDLLTMIGKGAFGEVR-VCREKTTGQVYAMKKLKKAEMLRRGQVEHVRAERNLLA 177

  Fly   774 EADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFEEELARFYIAEVTCAVDSVHKMG 838
            |.|:|::||||.||||.|:||.||:|:||||:|:||::.....||.|:||:||...|::|:|:..
plant   178 EVDSNYIVKLYCSFQDDDHLYLVMEYLPGGDMMTLLMRKDTLTEEEAKFYVAETVLAIESIHRHN 242

  Fly   839 FIHRDIKPDNILIDRDGHIKLTDFGLC----------TGFRWTHNSKYYQENGN----HSRQDSM 889
            :|||||||||:|:||.||::|:|||||          ..|....|....||.|:    .::|:.:
plant   243 YIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSAIGENDFSNNSNGSTEQEAGSTAPKRTQQEQL 307

  Fly   890 EPWEEYSENGPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLERSGYTQLCDYWSVGVILYEM 954
            |.|:.                  ::|.||:|.||||:|||||||.:.||...||:||:|.|:|||
plant   308 EHWQR------------------NRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 354

  Fly   955 LVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIRRLCASADKRLG-KSVDEVKSHD 1018
            |||.|||.::.|:.|.:|::||:..|..|.:|.|||||.|||..|..|..:||| |..||:|:|.
plant   355 LVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEAILSREAKDLINSLLCSVRRRLGSKGADELKAHT 419

  Fly  1019 FFKGIDFADMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSNDST-------MSSGDDVDQNDRTF 1076
            :|:.:|:..:....|.::||:....||.||:..|..:..:..|:       |.|..|::      
plant   420 WFETVDWDTIFDMDAAFVPEVNDDLDTQNFEKFDESESETQTSSKSGPWRKMLSSKDIN------ 478

  Fly  1077 HGFFEFTFRRF--FDDKQPPDMTD 1098
              |..:|::.|  .:|.|.|.|.:
plant   479 --FVGYTYKNFEIVNDYQVPGMAE 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 164/382 (43%)
S_TKc 719..1020 CDD:214567 150/315 (48%)
AT2G20470NP_001318254.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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