DRSC/TRiP Functional Genomics Resources

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Protein Alignment wts and cdc42bpb

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_021324167.1 Gene:cdc42bpb / 567039 ZFINID:ZDB-GENE-030131-3647 Length:1789 Species:Danio rerio


Alignment Length:363 Identity:144/363 - (39%)
Similarity:212/363 - (58%) Gaps:58/363 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 LKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTLRKADVLKRNQVAHVKAERDILA 773
            :|..::.:..|..||.||.||||||.:| |:..:..:||||.|.|.::|||.:.|..:.||::|.
Zfish    66 VKEMRLHRDDFEMLKVIGRGAFGEVAVV-KMKHTERVYAMKILNKWEMLKRAETACFREERNVLV 129

  Fly   774 EADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFE----EELARFYIAEVTCAVDSV 834
            ..|..|:..|:|:|||.:.||.||||..||||::||.|   ||    |::|:||:||:..|:.|:
Zfish   130 NGDCQWITTLHYAFQDDNYLYLVMDYYVGGDLLTLLSK---FEDRLPEDMAKFYVAEMVLAIHSI 191

  Fly   835 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQENGNHSRQDSMEPWEEYSENG 899
            |:..::||||||||:|:|.:|||:|.|||.|.                                 
Zfish   192 HQQRYVHRDIKPDNVLLDMNGHIRLADFGSCL--------------------------------- 223

  Fly   900 PKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLE-----RSGYTQLCDYWSVGVILYEMLVGQP 959
                     :|.....|.:...||||:||:||:|:     ...|...||:||:||.:||||.|:.
Zfish   224 ---------KMMQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 279

  Fly   960 PFLANSPLETQQKVINWEKTLHIPPQ-AELSREATDLIRRLCASADKRLGK-SVDEVKSHDFFKG 1022
            ||.|.|.:||..|::|.|:....|.. .::|.:|.|||:||..|.::|||: .::|.:.|.||.|
Zfish   280 PFYAESLVETYGKIMNHEERFQFPSHITDVSEDAKDLIQRLICSRERRLGQHGIEEFRKHAFFSG 344

  Fly  1023 IDFADMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSND 1060
            ||:.::|..:|||||::..|:|||||| ||.:.|::.|
Zfish   345 IDWENIRNMEAPYIPDVSSPSDTSNFD-VDDDVLKNPD 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 143/355 (40%)
S_TKc 719..1020 CDD:214567 121/311 (39%)
cdc42bpbXP_021324167.1 PKc_like 3..411 CDD:328722 144/363 (40%)
SbcC <437..>935 CDD:223496
KELK 524..602 CDD:318090
C1 1039..1088 CDD:237996
PH_MRCK 1098..1232 CDD:269949
CNH 1258..1523 CDD:307087
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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