DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and rock2b

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_021324031.1 Gene:rock2b / 321070 ZFINID:ZDB-GENE-060125-2 Length:1493 Species:Danio rerio


Alignment Length:474 Identity:162/474 - (34%)
Similarity:237/474 - (50%) Gaps:102/474 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   639 ERKEFRIRQYSPQAFKFFMEQHIENVIKSYRQRTYRKNQLEK------EMHKVGLPDQTQIEMRK 697
            :|.|.|:|:             :|.:||:.:.....::.|:.      :::...|.....|:  .
Zfish     7 KRIESRVRK-------------LETLIKNQKSPLNLESLLDSVTALALDLNHPALRKNKNID--A 56

  Fly   698 MLNQKESNYIRLKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTLRKADVLKRNQV 762
            .|::.|.....||..::....|.::|.||.||||.|.|| :...|..:||||.|.|.:::||:..
Zfish    57 FLSRYEKAVCNLKELQVKLDDFDRVKLIGRGAFGAVQLV-RHKVSQQVYAMKQLSKFEMVKRSDS 120

  Fly   763 AHVKAERDILAEADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFEEELARFYIAEV 827
            |....||||:|.:.:.|:|:|..:|||:..||.||:::|||||::|.....| .||.|:||.|||
Zfish   121 AFFWEERDIMAFSQSPWIVQLCCAFQDEKYLYLVMEFMPGGDLVTLTSNYDI-PEEWAQFYTAEV 184

  Fly   828 TCAVDSVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQENGNHSRQDSMEPW 892
            ..|:|::|.:|||||||||||:|:||:||:||.|||.|                           
Zfish   185 VLALDAIHSLGFIHRDIKPDNMLLDRNGHLKLADFGTC--------------------------- 222

  Fly   893 EEYSENGPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLERSG----YTQLCDYWSVGVILYE 953
                           .:|.....|...:.||||:||:||||...|    |.:.||:|||||.:||
Zfish   223 ---------------MKMDSTGMVRCDTAVGTPDYISPEVLMSQGGTGYYGRECDWWSVGVFIYE 272

  Fly   954 MLVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIRRLCASADKRLGKS-VDEVKSH 1017
            :|||..||.:.|.:.|..|:::.:.:|..|...|:|:.|.|||....:|.:.|||:: |||:|.|
Zfish   273 LLVGDTPFYSESLVGTYGKIMDHKNSLTFPDDIEMSKNAKDLICAFLSSREVRLGRTGVDEIKCH 337

  Fly  1018 DFFKGID--FADMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSNDSTMSSGDDVDQN-------- 1072
            .|||...  |..:|...||.:||:....||||||                 ||:..:        
Zfish   338 PFFKNDQWTFDTIRDTMAPVVPELSSDIDTSNFD-----------------DDIKDDPIGTETFP 385

  Fly  1073 -DRTFHG----FFEFTFRR 1086
             .|.|.|    |..||:.|
Zfish   386 PPRAFAGNQLPFVGFTYFR 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 143/376 (38%)
S_TKc 719..1020 CDD:214567 124/305 (41%)
rock2bXP_021324031.1 STKc_ROCK 51..402 CDD:270747 151/413 (37%)
SMC_N <432..1097 CDD:330553
PH_ROCK 1212..1316 CDD:269948
C1 1320..1374 CDD:237996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.