DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and rock2a

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_777288.1 Gene:rock2a / 317747 ZFINID:ZDB-GENE-030115-3 Length:1375 Species:Danio rerio


Alignment Length:479 Identity:170/479 - (35%)
Similarity:244/479 - (50%) Gaps:75/479 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   638 EERKEFRIRQYSPQAFKFFMEQHIENVIKSYRQRTYRK------NQLEKEMHKVGLPDQTQIEMR 696
            |.|.|.|:||             :|.:||..|.....:      |.|..::....|.....||  
Zfish     6 ERRMENRLRQ-------------LEAMIKDPRSAINLESLLDSMNALVLDLDFPALRKNKNIE-- 55

  Fly   697 KMLNQKESNYIRLKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTLRKADVLKRNQ 761
            ..||:.|.....::..:|....|.::|.||.||||||.|| :...|..:||||.|.|.:::||:.
Zfish    56 NFLNRYEKVMNHIRELQMRPEDFDRVKVIGRGAFGEVQLV-RHKASQKVYAMKVLSKFEMIKRSD 119

  Fly   762 VAHVKAERDILAEADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFEEELARFYIAE 826
            .|....||||:|.||:.|||:|..:|||..:||.||:|:|||||::|.....: .|:.|:||.||
Zfish   120 SAFFWEERDIMAFADSPWVVQLCCAFQDDRSLYMVMEYMPGGDLVNLTSTYDV-PEKWAKFYTAE 183

  Fly   827 VTCAVDSVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQENGNHSRQDSMEP 891
            |..|:|::|.|||||||:||||:|:||.||:||.|||.|                          
Zfish   184 VVLALDAIHSMGFIHRDVKPDNMLLDRYGHLKLADFGTC-------------------------- 222

  Fly   892 WEEYSENGPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLERSG----YTQLCDYWSVGVILY 952
                            .:|.....|...:.||||:||:||||:..|    |.:.||:|||||.:|
Zfish   223 ----------------MKMDGTGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFIY 271

  Fly   953 EMLVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIRRLCASADKRLGKS-VDEVKS 1016
            |||||..||.|:|.:.|..|:::.:.:|:.|...|:|:|..::|.......:.|||:| |:|:|.
Zfish   272 EMLVGDTPFYADSLVGTYSKIMDHKNSLNFPDDVEISQEGKNIICAFLTDREVRLGRSGVEEIKR 336

  Fly  1017 HDFFKGID--FADMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSNDSTMSSGDDVDQNDRTFHGF 1079
            |.||:...  |:.:|:..||.:||:....||||||.::.:|  ....|..:......|...|.||
Zfish   337 HPFFRNDQWTFSTIRETAAPVVPELSSDIDTSNFDEIEEDK--GEVETFPTPKAFVGNQLPFVGF 399

  Fly  1080 FEFTFRRFFDDKQPPDMTDDQAPV 1103
            ..|...:..:......|.:|. ||
Zfish   400 TYFKENQLLNAVNSSAMKNDH-PV 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 144/367 (39%)
S_TKc 719..1020 CDD:214567 126/305 (41%)
rock2aNP_777288.1 STKc_ROCK2 25..403 CDD:270771 155/425 (36%)
S_TKc 78..340 CDD:214567 126/305 (41%)
DUF4631 431..1028 CDD:292090
HR1_ROCK2 491..557 CDD:212028
Rho_Binding 965..1032 CDD:286056
PH_ROCK 1141..1246 CDD:269948
C1 1250..1304 CDD:237996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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