DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and Lats1

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_001128015.2 Gene:Lats1 / 308265 RGDID:1564085 Length:1130 Species:Rattus norvegicus


Alignment Length:1278 Identity:503/1278 - (39%)
Similarity:609/1278 - (47%) Gaps:379/1278 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GEKRGGR--------PNDKYTA-------EALESIK-----QDLTRFEVQNNHRNNQNYTPLRYT 49
            |||..|.        |...|:.       |..||::     .|..:.|...|..:.::...:|..
  Rat     4 GEKPEGYRQMRPKTFPASNYSGSSRQMLQEIRESLRNLSKPSDAAKAEHNLNKMSTEDPRQVRNP 68

  Fly    50 ATNGRNDALTPDYHHAKQPMEPPPSASPAPDVVIPPPPAIVGQPGAG----------------SI 98
            ...|.:.....:..::..|.....|:|..|..|  .|........||                ||
  Rat    69 PKFGTHHKALQEIRNSLLPFANETSSSRIPSEV--NPQMFQDLQAAGFDEDMVIQALQKTNNRSI 131

  Fly    99 SVSGVGVGVVGVANGRVPKM-MTALMPNKLIRKP-----SIERDTASSHYLRCSPALDSGAGSSR 157
            ..:...:..:...:.|..:| ..|..|.....||     ||.|.             .|..||..
  Rat   132 EAAVEFISKMSYQDPRREQMAAAAARPINATMKPGNVQHSISRK-------------QSWKGSKE 183

  Fly   158 SDSPHSH----------HTHQPSSRT-VGNPGGNGGFS---------------PSPSGFSEVAPP 196
            |..|..|          .:..|:|:. ||.|....|.:               |.|.....|.||
  Rat   184 SLVPQRHGPSLGENVVYRSESPNSQADVGRPLSGSGITAFAQAHPSNGQRVNPPPPPQVRSVTPP 248

  Fly   197 APPPRNPTACSAATPPPPV--PPTSQA--------YVKRR--------------SPALNNRPPAI 237
             ||||..|.....|.|||.  .|.||.        ||..|              .|.||..|  :
  Rat   249 -PPPRGQTPPPRGTTPPPPSWEPNSQTKRYSGNMEYVISRISPVPPGAWQEGYPPPPLNTSP--M 310

  Fly   238 APPTQR---------GNSPVITQN-----------GLKNPQQQLTQQLKSLNLYPGGGSGAV-VE 281
            .||.|.         |..|:|.|:           |::|...| |..:...|:.|   :||| .:
  Rat   311 NPPNQGQRGISSVPVGRQPIIMQSTSKFNFTPGRPGVQNGGGQ-TDFIMHQNVVP---TGAVNRQ 371

  Fly   282 PPPPY-----------LIQGGAGGAAPP-------PP-------------------PPSYTASMQ 309
            |||||           .:|.| |.||||       ||                   |...|...|
  Rat   372 PPPPYPLTPANGQSPSALQAG-GPAAPPSFSNGNVPPTMMVPNRNSHNMELYNINVPGLQTTWPQ 435

  Fly   310 SRQSPTQSQQSDYRKSP------------------SSGIYSATSAGSPSPITVSLPPAPLAKPQP 356
            |..:|.||..|...:.|                  |...:||.|..|.:.:| ::.|||:     
  Rat   436 SSSAPVQSSPSSGHEIPTWQPNIPVRSNSFNNPLGSRASHSANSQPSATTVT-AITPAPI----- 494

  Fly   357 RVYQARSQQPIIMQSVKSTQVQKPVLQTAVAPQSPSSASASNSPVHVLAAPPSYPQKSAAVVQQQ 421
                   |||     |||.:|.||.||||:||..||...   .||..: .|..:.:.:|:.|   
  Rat   495 -------QQP-----VKSMRVLKPELQTALAPTHPSWMP---QPVQTV-QPSPFSEGAASNV--- 540

  Fly   422 QQAAAAAHQQQHQHQQSKPPTPTTPPLVGLNSKPNCLEPPSYAKSMQAKAATVVQQQQQQQQQQQ 486
                                 |..||:.         |.|||..                     
  Rat   541 ---------------------PVIPPVA---------EAPSYQG--------------------- 554

  Fly   487 QVQQQQVQQQQQQQQQQLQALRVLQAQAQRERDQRERDQRERERDQQKLANGNPGRQMLPPPPYQ 551
                                                                       |||||.
  Rat   555 -----------------------------------------------------------PPPPYP 560

  Fly   552 SNNNNNSEIKPPSCNNNNIQISNSNLATTPPIPPAKYNNNSSNTGANSSGGSNGSTGTTASSSTS 616
            .:                      .|..||.:||.:..:........||.....|..:..|..:.
  Rat   561 KH----------------------LLHQTPSVPPYESASKPCKDDQPSSAKEEDSEKSLDSVDSG 603

  Fly   617 CKKIKH--ASPIPERKKISKEKEEERKEFRIRQYSPQAFKFFMEQHIENVIKSYRQRTYRKNQLE 679
            .|:.|.  .|||..||   .:|:|||:|.||:.|||||||||||||:|||:||::||.:||.|||
  Rat   604 DKEKKQITTSPITVRK---NKKDEERRESRIQSYSPQAFKFFMEQHVENVLKSHQQRLHRKKQLE 665

  Fly   680 KEMHKVGLPDQTQIEMRKMLNQKESNYIRLKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNH 744
            .||.:|||....|.:|||||.|||||||||||||||||||||:|.:|:||||||.|..|:|| ..
  Rat   666 NEMMRVGLSQDAQDQMRKMLCQKESNYIRLKRAKMDKSMFVKIKTLGIGAFGEVCLARKVDT-KA 729

  Fly   745 LYAMKTLRKADVLKRNQVAHVKAERDILAEADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLL 809
            |||.|||||.|||.|||||||||||||||||||.|||:||||||||||||||||||||||:||||
  Rat   730 LYATKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLL 794

  Fly   810 IKLGIFEEELARFYIAEVTCAVDSVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNS 874
            |::|||.|.||||||||:||||:||||||||||||||||||||||||||||||||||||||||:|
  Rat   795 IRMGIFPENLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 859

  Fly   875 KYYQENGNHSRQDSMEPWEEYSEN-----GPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLE 934
            |||| :|:|.|||||:...|:.:.     |.:...||||..|.|||.|||||||||||||||||.
  Rat   860 KYYQ-SGDHPRQDSMDFSSEWGDPSNCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL 923

  Fly   935 RSGYTQLCDYWSVGVILYEMLVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIRRL 999
            |:|||||||:|||||||:|||||||||||.:|||||.|||||:.:|||||||:||.||:|||.:|
  Rat   924 RTGYTQLCDWWSVGVILFEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKL 988

  Fly  1000 CASADKRLGKS-VDEVKSHDFFKGIDF-ADMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSNDST 1062
            |...:.||||: .||:|:|.|||.||| :|:|:|.|.|||:|.|||||||||||||:||      
  Rat   989 CRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQSASYIPKITHPTDTSNFDPVDPDKL------ 1047

  Fly  1063 MSSGDDVDQNDRTF-----------HGFFEFTFRRFFDDKQPP 1094
            .|.|::.:..:.|.           |.|:||||||||||...|
  Rat  1048 WSDGNEEENINDTLNGWYKNGKHPEHAFYEFTFRRFFDDNGYP 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 264/378 (70%)
S_TKc 719..1020 CDD:214567 230/306 (75%)
Lats1NP_001128015.2 UBA_like_SF 103..143 CDD:419673 5/39 (13%)
PHA03247 <183..590 CDD:223021 122/571 (21%)
STKc_LATS1 703..1084 CDD:270775 272/388 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335589
Domainoid 1 1.000 159 1.000 Domainoid score I3991
eggNOG 1 0.900 - - E1_KOG0608
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 694 1.000 Inparanoid score I658
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm44404
orthoMCL 1 0.900 - - OOG6_105652
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2473
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.800

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