DRSC/TRiP Functional Genomics Resources

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Protein Alignment wts and Cdc42bpb

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_006515826.1 Gene:Cdc42bpb / 217866 MGIID:2136459 Length:1730 Species:Mus musculus


Alignment Length:416 Identity:158/416 - (37%)
Similarity:231/416 - (55%) Gaps:77/416 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 LKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTLRKADVLKRNQVAHVKAERDILA 773
            :|..::.:..|..:|.||.||||||.:| |:..:..:||||.|.|.::|||.:.|..:.|||:|.
Mouse    66 VKDMQLHREDFEIIKVIGRGAFGEVAVV-KMKNTERIYAMKILNKWEMLKRAETACFREERDVLV 129

  Fly   774 EADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFE----EELARFYIAEVTCAVDSV 834
            ..|..|:..|:|:|||::.||.||||..||||::||.|   ||    |::|||||.|:..|:||:
Mouse   130 NGDCQWITALHYAFQDENYLYLVMDYYVGGDLLTLLSK---FEDKLPEDMARFYIGEMVLAIDSI 191

  Fly   835 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQENGNHSRQDSMEPWEEYSENG 899
            |::.::||||||||:|:|.:|||:|.|||.|.                                 
Mouse   192 HQLHYVHRDIKPDNVLLDVNGHIRLADFGSCL--------------------------------- 223

  Fly   900 PKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLE-----RSGYTQLCDYWSVGVILYEMLVGQP 959
                     :|.|...|.:...||||:||:||:|:     ...|...||:||:||.:||||.|:.
Mouse   224 ---------KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 279

  Fly   960 PFLANSPLETQQKVINWEKTLHIPPQ-AELSREATDLIRRLCASADKRLGKS-VDEVKSHDFFKG 1022
            ||.|.|.:||..|::|.|:....|.. .::|.||.|||:||..|.::|||:: :::.|.|.||:|
Mouse   280 PFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 344

  Fly  1023 IDFADMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSNDSTMSSGDDVDQNDRTFHGF------FE 1081
            :::.::|..:|||||::..|:|||||| ||.:.|| |...:..|....     |.|.      |.
Mouse   345 LNWENIRNLEAPYIPDVSSPSDTSNFD-VDDDMLR-NIEILPPGSHTG-----FSGLHLPFIGFT 402

  Fly  1082 FTFRRFFDDK-------QPPDMTDDQ 1100
            ||....|.|:       |...:|.|:
Mouse   403 FTTESCFSDRGSLKSMTQSNTLTKDE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 148/371 (40%)
S_TKc 719..1020 CDD:214567 125/311 (40%)
Cdc42bpbXP_006515826.1 STKc_MRCK_beta 3..411 CDD:270774 154/397 (39%)
SbcC 429..>933 CDD:223496 158/416 (38%)
KELK 527..606 CDD:374120
C1 1044..1093 CDD:237996
PH_MRCK 1103..1237 CDD:269949
CNH 1263..1529 CDD:366300
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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