DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and Rock1

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_033097.1 Gene:Rock1 / 19877 MGIID:107927 Length:1354 Species:Mus musculus


Alignment Length:408 Identity:153/408 - (37%)
Similarity:227/408 - (55%) Gaps:63/408 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   695 MRKMLNQKESNYI--------RLKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLYAMKTL 751
            :||  |:...|::        :::..:|....:..:|.||.||||||.|| :..::..:||||.|
Mouse    46 LRK--NKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV-RHKSTRKVYAMKLL 107

  Fly   752 RKADVLKRNQVAHVKAERDILAEADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIKLGIFE 816
            .|.:::||:..|....||||:|.|::.|||:|:|:|||...||.||:|:|||||::|:....: .
Mouse   108 SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-P 171

  Fly   817 EELARFYIAEVTCAVDSVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQENG 881
            |:.||||.|||..|:|::|.|||||||:||||:|:|:.||:||.|||.|                
Mouse   172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC---------------- 220

  Fly   882 NHSRQDSMEPWEEYSENGPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLERSG----YTQLC 942
                                      .:|.....|...:.||||:||:||||:..|    |.:.|
Mouse   221 --------------------------MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC 259

  Fly   943 DYWSVGVILYEMLVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIRRLCASADKRL 1007
            |:|||||.|||||||..||.|:|.:.|..|::|.:.:|..|...::|:||.:||.......:.||
Mouse   260 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRL 324

  Fly  1008 GKS-VDEVKSHDFFKGIDFA--DMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSNDSTMSSGDDV 1069
            |:: |:|:|.|.|||...:|  .:|...||.:|::....||||||.::.:|  .::.|.......
Mouse   325 GRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDK--GDEETFPIPKAF 387

  Fly  1070 DQNDRTFHGFFEFTFRRF 1087
            ..|...|.||..::.||:
Mouse   388 VGNQLPFVGFTYYSNRRY 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 144/367 (39%)
S_TKc 719..1020 CDD:214567 126/305 (41%)
Rock1NP_033097.1 STKc_ROCK1 2..406 CDD:270772 153/408 (38%)
S_TKc 76..338 CDD:214567 126/305 (41%)
Interaction with FHOD1. /evidence=ECO:0000250 368..727 10/40 (25%)
Smc <422..>1097 CDD:224117
HR1_ROCK1 489..554 CDD:212029
SHROOM3 binding. /evidence=ECO:0000269|PubMed:22493320 707..946
Rho_Binding 949..1014 CDD:286056
RHOA binding. /evidence=ECO:0000250 998..1010
Auto-inhibitory. /evidence=ECO:0000250 1115..1354
PH_ROCK 1119..1225 CDD:269948
C1 1229..1283 CDD:237996
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1333..1354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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