DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wts and lats1

DIOPT Version :9

Sequence 1:NP_733403.1 Gene:wts / 43651 FlyBaseID:FBgn0011739 Length:1105 Species:Drosophila melanogaster
Sequence 2:XP_017949762.1 Gene:lats1 / 100145677 XenbaseID:XB-GENE-959763 Length:1117 Species:Xenopus tropicalis


Alignment Length:1210 Identity:487/1210 - (40%)
Similarity:600/1210 - (49%) Gaps:310/1210 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AGEKRGGRPNDKYTA--EALESIKQDLTRF-EVQ------NNHRNNQNYTPLRYTA--------- 50
            |.:.|.||...|:..  :||..|:..|..| .|.      |:..|.|.:..|:...         
 Frog    57 AEDSRQGRSTTKFGTYHKALAEIRNSLLPFANVSGSSPRGNSEINRQMFHDLQQAGFDEDMVIRA 121

  Fly    51 ---TNGRNDALTPDY----HHAKQPMEPPPSASPAPDVVIPP----PPAIVGQPGAGSISVSGVG 104
               ||.|:.....:|    ::.:...||..:|......:.||    .|....|...||       
 Frog   122 LQQTNSRSIEAAIEYISRMNYPEMYQEPHIAARTLNASIKPPGNMQNPVNRRQSWKGS------- 179

  Fly   105 VGVVGVANGRVPKMMTALMPNKLIRKPSIERDTASSHYLRCSPALDSGAGSSRSDSPHSHHTHQP 169
                          ..:|:|.:|:                 ||..|:...:|.:.|         
 Frog   180 --------------KESLIPQRLV-----------------SPLSDNVVYASENSS--------- 204

  Fly   170 SSRTVGNPGGNGGFS---------------PSPSGFSEVAPPAPPPRNPTACSAATPPP---PVP 216
            |...:|.|....|.|               |.|.....|.||.||||      ..||||   ..|
 Frog   205 SQTEMGRPLSGSGLSAFAQALPVNGQRVNPPPPPQMRSVTPPPPPPR------GQTPPPKGTTPP 263

  Fly   217 PTS-QAYVKRRS-------PALNNRP--------PAIAPPTQR-----------GNSPVITQ--- 251
            ||| :...||.|       |.:|:.|        |..:..||.           |..|:|.|   
 Frog   264 PTSWEPQPKRYSGNMEFLIPRMNSIPSGSRQEGFPVSSVNTQSQGQRAINSVPVGRQPIIMQTSN 328

  Fly   252 ---------NGLKN---PQQQLTQQLKSLNLYPGGGSGAVVEPPPPYLIQGGAGGAAPPPPPPSY 304
                     :|::|   ..:.:|.|        |||:....:|||||.|..|         |.:.
 Frog   329 NSKFAYSGRSGMQNGNGSSEFITNQ--------GGGNIGGRQPPPPYSIPNG---------PNTT 376

  Fly   305 TASMQSRQ-SPTQSQQSDYRKSPSSGIYSATSAGSPSPITVSLPPAPLAKPQPRVYQARSQQ--P 366
            |..:||.. .|..|...:....|.|.:.|..::.:.....:|||..|.:.|     ||.|.|  |
 Frog   377 TLQVQSGSGGPLSSNAYNNSNVPPSMLVSNRNSHNLEMYNISLPGHPTSWP-----QASSTQSAP 436

  Fly   367 IIMQSVKSTQVQKPV----LQTAVAPQSPSSASASNSPVHVLAAPPS---YPQKSAAVVQQQQQA 424
            .....:.|.|...||    ....||.....|.:...|...|.|..||   .|.||..|::.:.|.
 Frog   437 GSNHDMLSWQTNIPVRSNSFNNPVASWQALSTNTQTSATTVTAVTPSPIQQPVKSIRVLKPELQT 501

  Fly   425 AAAAHQQQHQHQQSKPPTPTTPPLVGLNSKPNCL-EPPSYAKSMQAKAATVVQQQQQQQQQQQQV 488
            |.|               ||.|..:..|.:|... |..|:..|.|...|...|.           
 Frog   502 ALA---------------PTHPTWMTPNVQPGPFQEGVSHNTSAQLAEAPNYQG----------- 540

  Fly   489 QQQQVQQQQQQQQQQLQALRVLQAQAQRERDQRERDQRERERDQQKLANGNPGRQMLPPPPYQSN 553
                                                                     |||||..:
 Frog   541 ---------------------------------------------------------PPPPYPKH 548

  Fly   554 --NNNNSEIKPPSCNNNNIQISNSNLATTPPIPPAKYNNNSSNTGANSSGGSNGSTGTTASSSTS 616
              ..|.:..:|      .::.|..:.|........:...|:..|           ||.|.     
 Frog   549 LLQQNTTVYEP------GLKSSKEDAAGVSTCTQEEMEKNTEPT-----------TGITE----- 591

  Fly   617 CKKIKHASPIPERKKISKEKEEERKEFRIRQYSPQAFKFFMEQHIENVIKSYRQRTYRKNQLEKE 681
             ||....||:|.|:   .:::|||:|.:|:.|||||||||||||:||::||:.||.:||.|||.|
 Frog   592 -KKQITTSPVPVRR---NKRDEERRESQIQSYSPQAFKFFMEQHVENILKSHHQRLHRKKQLENE 652

  Fly   682 MHKVGLPDQTQIEMRKMLNQKESNYIRLKRAKMDKSMFVKLKPIGVGAFGEVTLVSKIDTSNHLY 746
            |.:|||..:.|.:|||||.||||||||||||||:||||||:|.:|:||||||.|..|.|| |.||
 Frog   653 MMRVGLSQEAQDQMRKMLCQKESNYIRLKRAKMEKSMFVKIKTLGIGAFGEVCLARKTDT-NALY 716

  Fly   747 AMKTLRKADVLKRNQVAHVKAERDILAEADNNWVVKLYYSFQDKDNLYFVMDYIPGGDLMSLLIK 811
            |||||||.|||.|||||||||||||||||||.|||:||||||||||||||||||||||:|||||:
 Frog   717 AMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 781

  Fly   812 LGIFEEELARFYIAEVTCAVDSVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKY 876
            :|:|.|:||||||||:||||:|||||.||||||||||||||||||||||||||||||||||:|||
 Frog   782 MGVFPEDLARFYIAELTCAVESVHKMDFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 846

  Fly   877 YQENGNHSRQDSMEPWEEYSEN-----GPKPTVLERRRMRDHQRVLAHSLVGTPNYIAPEVLERS 936
            || :|:|.|||||:...|:.:.     |.:...||.|..|.|||.|||||||||||||||||.|:
 Frog   847 YQ-SGDHLRQDSMDFSNEWGDPANCRCGDRLKPLEWRAARQHQRCLAHSLVGTPNYIAPEVLLRT 910

  Fly   937 GYTQLCDYWSVGVILYEMLVGQPPFLANSPLETQQKVINWEKTLHIPPQAELSREATDLIRRLCA 1001
            |||||||:|||||||||||||||||||.||:|||.|||.|:.|||||.||:||.||:|||.:||.
 Frog   911 GYTQLCDWWSVGVILYEMLVGQPPFLAQSPVETQMKVIKWQTTLHIPAQAKLSPEASDLIVKLCR 975

  Fly  1002 SADKRLGKS-VDEVKSHDFFKGIDF-ADMRKQKAPYIPEIKHPTDTSNFDPVDPEKLRSNDSTMS 1064
            ..:.||||: |||:|.|.|||.||| :|:|:|.|||.|.|.||||||||||||||||.:::.   
 Frog   976 GPEDRLGKNGVDEIKVHPFFKNIDFSSDLRQQPAPYTPTITHPTDTSNFDPVDPEKLWNDED--- 1037

  Fly  1065 SGDDVDQND----------RTFHGFFEFTFRRFFDDKQPP 1094
              .|.::||          ...|.|:||||||||||...|
 Frog  1038 --KDGNKNDTLNGWYKNGKHPEHAFYEFTFRRFFDDNGHP 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wtsNP_733403.1 STKc_LATS 717..1078 CDD:270749 265/377 (70%)
S_TKc 719..1020 CDD:214567 230/306 (75%)
lats1XP_017949762.1 UBA_LATS1 102..142 CDD:270580 6/39 (15%)
STKc_LATS1 688..1069 CDD:270775 273/387 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 458 1.000 Domainoid score I485
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 641 1.000 Inparanoid score I804
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 1 1.000 - - FOG0000273
OrthoInspector 1 1.000 - - otm47451
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4821
SonicParanoid 1 1.000 - - X2473
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.000

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