DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh1 and hbn

DIOPT Version :10

Sequence 1:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster
Sequence 2:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster


Alignment Length:393 Identity:98/393 - (24%)
Similarity:140/393 - (35%) Gaps:122/393 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   559 PETKEMAPTPEATEAATPIKREESREASPDPESYRSSSQAIKQEQEPLNVAEERQTPVE------ 617
            |.....||..|     :|:.|         |.:..|..|.:..:.:    .:...||.|      
  Fly    17 PPAMRPAPVQE-----SPVSR---------PRAVYSIDQILGNQHQ----IKRSDTPSEVLITHP 63

  Fly   618 EHAPVEHAADLRCSRCSKQFNHPTELVQHEKVLCGLIKEELEQHFQQQQATSFALASASEED--- 679
            .|....|...|..|. |...||.:...|.:       ..:.:.|.||||........|..||   
  Fly    64 HHGHPHHIHHLHSSN-SNGSNHLSHQQQQQ-------HSQQQHHSQQQQQQQQLQVQAKREDSPT 120

  Fly   680 EEDEEMDVEEEPRQESG------------ERKV-RVRTAINEEQQQQLKQHYSLNARP---SRDE 728
            ..|..:||:.:....|.            .||| |.||.....|..||::.:.....|   :|::
  Fly   121 NTDGGLDVDNDDELSSSLNNGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED 185

  Fly   729 FRMIAARLQLDPRVVQVWFQNNRSRERKMQSFQNNQAAGAAPP---MPIDSQASLTREDQPLDLS 790
               :|.||.|....|||||||.|::.||.:.|.|...||...|   :|          :.||.: 
  Fly   186 ---LAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLP----------EFPLGI- 236

  Fly   791 VKRDPLTP----------KSESSPPYIA------PPSGEA--LNPEAI----------------- 820
                ||.|          :||..||:.|      |.:..|  |.|:.:                 
  Fly   237 ----PLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLPQHLMAPHYKLPNFHTLLSQY 297

  Fly   821 ----NLSRKFSTSASMSPASIS---PSSAAALYFG--AAPPPSPPNSQLDSTPRSGQAFPGLPPY 876
                ||:..|...|:.:.|:.|   |.: .:|:.|  |....|||.|  :|:||..   |.|.|:
  Fly   298 MGLSNLNGIFGAGAAAAAAAASAGYPQN-LSLHAGLSAMSQVSPPCS--NSSPRES---PKLVPH 356

  Fly   877 MLP 879
            ..|
  Fly   357 PTP 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 20/57 (35%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:463886
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:463886
C2H2 Zn finger 1025..1042 CDD:275368
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 20/58 (34%)
Blue background indicates that the domain is not in the aligned region.

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