DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh1 and Abd-B

DIOPT Version :10

Sequence 1:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster
Sequence 2:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster


Alignment Length:628 Identity:114/628 - (18%)
Similarity:169/628 - (26%) Gaps:269/628 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 QQQQQQLQQQQQLQQQQQHQMAMQQLLPPQLPGSNSSVGSNSAYDLDLSAPRSTSSPGSTTGDLS 286
            ||||||.|:||.||:||||...:.......||                       .|..||....
  Fly     9 QQQQQQQQEQQHLQEQQQHLQQLHHHAHHHLP-----------------------QPLHTTSHHH 50

  Fly   287 GAYPCMQCTASFASREQLEQHEQLHSPCGPAAVSNVSQTCRICHKAFANVYRLQRHMISHDESAL 351
            .|:|.:|      .::|.:||..:.|  .|::|....|                           
  Fly    51 SAHPHLQ------QQQQQQQHAVVAS--SPSSVLQQQQ--------------------------- 80

  Fly   352 LRKFKCKECDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKCISMGLKLNN 416
                     .::....|....|..::....|                                  
  Fly    81 ---------QQSTPTTHSTPTHAVMYEDPPP---------------------------------- 102

  Fly   417 NRALLKRLEKSPGSASSASRRSPSDHGKGKLP----EQPSLPGLPHPMSYFASDAQVQ------- 470
                                          :|    :|..||. |..........|.|       
  Fly   103 ------------------------------VPLVAVQQQHLPA-PQQQQQLQQQQQQQQQQLATT 136

  Fly   471 --GGSAAPAPFPPFHPNYMNAALLAFPHNFMAAAAGLDPRVHPYSIQRLLQLSAAGQQQREEERE 533
              .|:.:||. .|..|:......|..||:                 |:|.|..............
  Fly   137 PVAGALSPAQ-TPTGPSAQQQQHLTSPHH-----------------QQLPQQQTPNSVASGASSN 183

  Fly   534 EQQKQQQHDEEETPDEPKLVMDIEEPETKEMAPTPEATEAATPIKREESREASPDPESYRSSSQA 598
            .||:|||.:....|.:.::|           |||                .||..|.|..|..:.
  Fly   184 LQQQQQQQNAAVAPGQTQIV-----------APT----------------TASVSPSSVSSQKED 221

  Fly   599 IKQ--EQEPLNVAEERQTP---------VEEHAP---------VEHAADLRCSRCSKQFNHPTEL 643
            |..  :..||::...|..|         |:.|..         .:|.......| ...|.:|...
  Fly   222 INMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDR-KHMFAYPYPE 285

  Fly   644 VQHEKVLCGLIKEELEQHFQQQQATSFALASASEEDEEDE-----EMDVE-------EEPRQES- 695
            .|..      :.:....:::..|.||.|.|:|...:.|..     ...||       |.|...| 
  Fly   286 TQFP------VGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSP 344

  Fly   696 --------------------------------------GERKVR-VRTAINEEQQQQLKQHYSLN 721
                                                  |:..|| .|...::.|..:|::.:..|
  Fly   345 GGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFN 409

  Fly   722 ARPSRDEFRMIAARLQLDPRVVQVWFQNNRSRERKMQSFQNNQ 764
            |..|:.:...:|..|||..|.|::||||.|.:.:|....|.||
  Fly   410 AYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQ 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368 4/19 (21%)
C2H2 Zn finger 326..346 CDD:275368 0/19 (0%)
zf-H2C2_2 338..365 CDD:463886 0/26 (0%)
zf-C2H2 355..377 CDD:395048 2/21 (10%)
C2H2 Zn finger 357..377 CDD:275368 2/19 (11%)
zf-H2C2_2 369..391 CDD:463886 2/21 (10%)
Homeodomain 701..756 CDD:459649 18/55 (33%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:463886
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:463886
C2H2 Zn finger 1025..1042 CDD:275368
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 18/55 (33%)
Blue background indicates that the domain is not in the aligned region.

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