DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh1 and lab

DIOPT Version :10

Sequence 1:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:793 Identity:147/793 - (18%)
Similarity:251/793 - (31%) Gaps:262/793 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 MSGSSRRYAKSPLASNNNSSTANA-NNNSTSSQSMNNNSELAKNHNSANKMSPMCSPGSLTPGDL 183
            |...|..|...|   :::...||| :..||::.|..|.|                        ..
  Fly     1 MMDVSSMYGNHP---HHHHPHANAYDGYSTTTASAANAS------------------------SY 38

  Fly   184 FAQLQHPPP-QLPPHLHAQFMAAAASLAMQSARTASSPSQ---QQQQQL-----QQQQQLQQQQQ 239
            ||..||.|. ||......|.:.........:...:|||..   |||.||     ...|.:||.||
  Fly    39 FAPQQHQPHLQLQQQQQHQHLQQPQQHLTYNGYESSSPGNYYPQQQAQLTPPPTSSHQVVQQHQQ 103

  Fly   240 HQMAMQQLLPPQLPGSNSSVGSNSAYDLDLSAPRSTSSPGSTTGDLSGAYPCMQCTASFASREQL 304
            .|.|.||.|.|     :|.:.|.||.:..::...:|.:||:.      .:|     :|.:..:..
  Fly   104 QQQAQQQQLYP-----HSHLFSPSAAEYGITTSTTTGNPGTP------LHP-----SSHSPADSY 152

  Fly   305 EQHEQLHSPCGPAAV------SNVSQTCRICHKAFANVYRLQRH--MISHDESALLRKFKCKECD 361
            .:.:.:||....|||      ||.|........|.:|..:.|:.  :||.:...:.....|....
  Fly   153 YESDSVHSYYATAAVATVAPPSNSSPITAANASATSNTQQQQQQAAIISSENGMMYTNLDCMYPT 217

  Fly   362 KAFKFKHH-----LKEHVR--IHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKCISMGLKLNNNRA 419
            ...:...|     ::|...  :|:...|                            |:.|.:...
  Fly   218 AQAQAPVHGYAGQIEEKYAAVLHASYAP----------------------------GMVLEDQDP 254

  Fly   420 LLKRLEKSPGSASSASRRSPSDHGKGKLPEQPSLPGLPHPMSYFASDAQVQGGSAAPAPFPPFHP 484
            ::::          |::.....|.:             |....:|.||....|..|         
  Fly   255 MMQQ----------ATQSQMWHHQQ-------------HLAGSYALDAMDSLGMHA--------- 287

  Fly   485 NYMNAALLAFPHNFMAAAAGLDPRVHPYSIQRLLQLSAAGQQQREEEREEQQ--KQQQHDEEETP 547
             :|:..|   ||..:...|.     :|:            |||.:.::::||  :|.||.:.::|
  Fly   288 -HMHHGL---PHGHLGNLAN-----NPH------------QQQPQVQQQQQQPHQQPQHPQNQSP 331

  Fly   548 DEPKLVMDIEEPETKEMAP------------------TPEATEAATPIKREESREASPDPESYRS 594
            ...      ::.....::|                  |..:|.|:.......::..||   ::.|
  Fly   332 AAH------QQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSKSP---NHSS 387

  Fly   595 SSQAIKQEQEPLNVAEERQTPVEEHAPVEHAADLRCSRCSKQF--------------NHPTEL-- 643
            |....|..|...||.:    |.....|....|.:...:.:.|.              |.|..:  
  Fly   388 SIPTYKWMQLKRNVPK----PQAPKLPASGIASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGG 448

  Fly   644 -----------VQHEKVLCGLIKEELEQH---FQQQQATSFALASASEEDEEDEEMDVEEEPRQE 694
                       ||:..::..........|   ......:...|:|.|.....:           .
  Fly   449 NGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSNTN-----------N 502

  Fly   695 SGERKVRVRTAINEEQQQQLKQHYSLNARPSRDEFRMIAARLQLDPRVVQVWFQNNRSRERK--- 756
            ||      ||....:|..:|::.:..|...:|.....||..|||:...|::||||.|.:::|   
  Fly   503 SG------RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVK 561

  Fly   757 -------MQSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKRD-------------PLTPKSE 801
                   :.:..:.......||.        .::.||.:|.:|..             |.||.:.
  Fly   562 EGLIPADILTQHSTSVISEKPPQ--------QQQPQPPELQLKSQGSDLGGNELATGAPSTPTTA 618

  Fly   802 SSPPYIAPPSGEA 814
            .:  ..||.|.::
  Fly   619 MT--LTAPTSKQS 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368 1/19 (5%)
C2H2 Zn finger 326..346 CDD:275368 4/21 (19%)
zf-H2C2_2 338..365 CDD:463886 4/28 (14%)
zf-C2H2 355..377 CDD:395048 3/28 (11%)
C2H2 Zn finger 357..377 CDD:275368 3/26 (12%)
zf-H2C2_2 369..391 CDD:463886 4/28 (14%)
Homeodomain 701..756 CDD:459649 17/54 (31%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:463886
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:463886
C2H2 Zn finger 1025..1042 CDD:275368
labNP_476613.1 Homeodomain 505..558 CDD:459649 17/52 (33%)
Blue background indicates that the domain is not in the aligned region.

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