DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh1 and otp

DIOPT Version :10

Sequence 1:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:492 Identity:92/492 - (18%)
Similarity:139/492 - (28%) Gaps:243/492 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   680 EEDEEMDVEEEPRQESGERKVRVRTAINEEQQQQLKQHYSLNARPS---RDEFRMIAARLQLDPR 741
            ::|:.:|..::.|.         ||.....|..:|::.:|....|.   |:|   ||.|:.|...
  Fly   106 QQDQHLDKNKQKRH---------RTRFTPAQLNELERCFSKTHYPDIFMREE---IAMRIGLTES 158

  Fly   742 VVQVWFQNNRSRERKMQSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKRDPLTPKSESSPPY 806
            .|||||||.|::.:|                                                  
  Fly   159 RVQVWFQNRRAKWKK-------------------------------------------------- 173

  Fly   807 IAPPSGEALNPEAINLSRKFSTSASMSPASISPSSAAALYFGAAPPPSPPNSQLDSTPRSGQAFP 871
                             ||.:|:...:|.::.||.                              
  Fly   174 -----------------RKKTTNVFRTPGALLPSH------------------------------ 191

  Fly   872 GLPPYMLPMSLPMEALFKMRPGGDFASNHALMNSIKLPDYRGTSLSPGGSEKRSWRDDDSRISHE 936
            ||||:                 |...:|.|:.:.:     .||.:..|                 
  Fly   192 GLPPF-----------------GANITNIAMGDGL-----CGTGMFGG----------------- 217

  Fly   937 DEFGAGVLMPPKPRRGKAETHGHAGDPDLPYVCDQCDKAFAKQSSLARHKYEHSGQRPYQCIECP 1001
            |.:..||         ...|.|..          |.:::....|||      :||          
  Fly   218 DRWSVGV---------NPMTAGFG----------QLNQSSPLSSSL------NSG---------- 247

  Fly  1002 KAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYREXVSDTSVPPTCQ 1066
                          |:||   ......|    .:|||..:..:.......|:..|...|..|:..
  Fly   248 --------------LNSG---INMGSAL----GAGSYQHYGLNALGDSMMYQHSVGGVSCGPSGS 291

  Fly  1067 PGA---------NPLAPPAMAS--NRGRRRVQVPAGNPPYTPHHQHPHHPHLAAMAAFQQQHQQQ 1120
            |.|         :.:.||.:::  |..:..:.   |.|  .|.||...          ||.||.|
  Fly   292 PSATTPPNMNSCSSVTPPPLSAQPNSSQNELN---GEP--MPLHQQQQ----------QQTHQHQ 341

  Fly  1121 QQQ-HQHHRLSWNGGGVMLPPPPSQQAHR-PTAPHPP 1155
            ||| ||||        .|.||.|:||..: |.:...|
  Fly   342 QQQTHQHH--------PMAPPTPTQQQQQLPQSMQSP 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 20/57 (35%)
C2H2 Zn finger 969..989 CDD:275368 4/19 (21%)
zf-H2C2_2 981..1006 CDD:463886 4/24 (17%)
C2H2 Zn finger 997..1017 CDD:275368 0/19 (0%)
zf-H2C2_2 1009..1034 CDD:463886 4/24 (17%)
C2H2 Zn finger 1025..1042 CDD:275368 4/16 (25%)
otpNP_001286654.1 Homeodomain 117..168 CDD:459649 20/62 (32%)
Blue background indicates that the domain is not in the aligned region.

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