DRSC/TRiP Functional Genomics Resources

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Protein Alignment zfh1 and Hinfp

DIOPT Version :9

Sequence 1:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster
Sequence 2:XP_002729961.2 Gene:Hinfp / 300665 RGDID:1311492 Length:528 Species:Rattus norvegicus


Alignment Length:373 Identity:76/373 - (20%)
Similarity:119/373 - (31%) Gaps:117/373 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 CTASFASREQLEQHEQLHS--------PCGPAAVSNVS-------QT--------CRICHKAFAN 335
            ||.:|..|.:|.:|.:.|:        .||....:|..       ||        |..|.|.||.
  Rat   173 CTCTFKDRCKLREHLRSH
TQEKVVACPTCGGMFANNTKFLDHIRRQTSLDQQRFQCSHCSKRFAT 237

  Fly   336 VYRLQRHMISHDESALLRKFKCKECDKAFKFKHHLKEHVRI-HSGEKPFGCDNCGKRFSHSGSFS 399
            ...|:.||.:|     :..:||..||........|:.|:|. ||.::||.||.|.....:.....
  Rat   238 ERLLRDHMRNH-----VNHYKCPLCDMTCPLPSSLRNHMRFRHSEDRPFKCDCCDYSCKNLIDLR 297

  Fly   400 SHMTSKKCISMGLKLNNNRALLKRLEKSPGSASSASRRSPSDHGKGKLPEQPSLPGLPHPMSYFA 464
            .|:.:           :::....|.:....|.|:.|..|...|.: |:.|..|   .|....:..
  Rat   298 KHLDT-----------HSKESAYRCDFENCSFSARSLSSVKSHHR-KVHEGDS---EPRYKCHVC 347

  Fly   465 SDAQVQGGSAA-----------PAPFPPF-----HPNYMNAALLAF------PHNFMAAAAGLDP 507
            .....:|.:..           |:..|.|     ...||...|:.:      .........|.||
  Rat   348 DKCFTRGNNLTVHLRKKHQFKWPSGHPRFRYKEHEDGYMRLQLVRYESVELTQQLLQQLQEGSDP 412

  Fly   508 --RVHPYSIQRLLQLSAAGQQQREEEREEQQK--------------------------QQQHD-- 542
              .::..|:|.::..:..|....|||.||:.:                          |.|.|  
  Rat   413 GLALNESSLQGIVLETVLGGPGPEEETEEEGRVVEGTALSASQDNPSSALHMVSQTDAQGQRDLV 477

  Fly   543 ---EEETPDEPKLVMDIEEPETKE------------------MAPTPE 569
               ..|.|.||..|.:..:.:.|.                  .:|||:
  Rat   478 YYVLSEAPGEPPPVSETLKRDGKASRDTRGARRPDGLRLQSLTSPTPD 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368 6/16 (38%)
C2H2 Zn finger 326..346 CDD:275368 8/19 (42%)
zf-C2H2 355..377 CDD:278523 7/22 (32%)
C2H2 Zn finger 357..377 CDD:275368 6/20 (30%)
zf-H2C2_2 369..391 CDD:290200 10/22 (45%)
Homeobox 703..755 CDD:278475
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:290200
COG5048 992..>1045 CDD:227381
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:290200
C2H2 Zn finger 1025..1042 CDD:275368
HinfpXP_002729961.2 C2H2 Zn finger 171..190 CDD:275368 6/16 (38%)
C2H2 Zn finger 198..220 CDD:275368 4/21 (19%)
COG5048 <225..378 CDD:227381 38/172 (22%)
C2H2 Zn finger 228..248 CDD:275368 8/19 (42%)
C2H2 Zn finger 254..275 CDD:275368 6/20 (30%)
C2H2 Zn finger 283..303 CDD:275368 4/30 (13%)
C2H2 Zn finger 311..334 CDD:275368 6/23 (26%)
C2H2 Zn finger 344..362 CDD:275368 1/17 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354468
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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