DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2h and AT3G44100

DIOPT Version :9

Sequence 1:NP_001247376.1 Gene:Npc2h / 43649 FlyBaseID:FBgn0039801 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_189996.1 Gene:AT3G44100 / 823530 AraportID:AT3G44100 Length:152 Species:Arabidopsis thaliana


Alignment Length:150 Identity:32/150 - (21%)
Similarity:59/150 - (39%) Gaps:20/150 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLPVAFALVLSSVSAEIVNFQTCEDSVDSCSISQVRVTPCPEANANAACHIRRRHRFTMSFDFTP 71
            ||.|.|...|.:.|     |..|:..:|...::.|:::|.|..:..||       .|.:......
plant    13 LLSVFFLPALHATS-----FTYCDKRLDPVKVTGVKISPDPVVSGAAA-------TFKIFGSTGE 65

  Fly    72 HFDADTLVASLGWAKSENVELPLLTMDQEACKYTTCPVRSG-VTQTYTNNMPADARFPLSPYTIR 135
            ......:|..:.:     |.:|:.|...:.|..|.|||..| ...:::..:|:..  |...||::
plant    66 DISGGKVVIRVLY-----VGIPVHTETHDLCDETACPVAPGSFVLSHSQTLPSIT--PPGTYTLK 123

  Fly   136 WALKDPVSQKRCCFTIDIKV 155
            ..:.|....:..|.:...|:
plant   124 MTINDKNGGRLTCISFKFKI 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2hNP_001247376.1 Npc2_like 26..153 CDD:238458 25/127 (20%)
AT3G44100NP_189996.1 PG-PI_TP 27..141 CDD:238459 25/127 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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