DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2h and AT3G11780

DIOPT Version :10

Sequence 1:NP_651824.1 Gene:Npc2h / 43649 FlyBaseID:FBgn0039801 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001189862.1 Gene:AT3G11780 / 820352 AraportID:AT3G11780 Length:171 Species:Arabidopsis thaliana


Alignment Length:175 Identity:44/175 - (25%)
Similarity:68/175 - (38%) Gaps:46/175 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSLLPVAFALVLSSVSAEIVNFQTCEDSVD-SCSISQVRVTPCPEANANAACHIRRRHRFTMSFD 68
            |||....|.||.:.|:|..|::  |:::.: ...:..|.:||.|.|....|       .|.:|.:
plant     8 SSLAISYFLLVSTIVAATDVHY--CDNNEEYEVKVQGVDITPYPIARGEPA-------TFRISAN 63

  Fly    69 FTPHFDADTLVASL---GW-AKSENVELPLLTMDQEACKYTTCPVRSG--------VTQTYTNNM 121
            ......:..||..:   || ..||..:|         |..|:|||..|        |...||  .
plant    64 TDTEISSGKLVIEVSYFGWHIHSETHDL---------CDETSCPVAIGDFLVAHSQVLPGYT--P 117

  Fly   122 PADARFPL-----------SPYTIRWALKDPVSQKRCC--FTIDI 153
            |.:.||.|           ..|:::..:.|...::..|  |:.||
plant   118 PTEKRFNLVSIAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDI 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2hNP_651824.1 Npc2_like 26..153 CDD:238458 33/152 (22%)
AT3G11780NP_001189862.1 PG-PI_TP 27..160 CDD:238459 34/152 (22%)

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