DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2h and AT2G16005

DIOPT Version :9

Sequence 1:NP_001247376.1 Gene:Npc2h / 43649 FlyBaseID:FBgn0039801 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_565385.1 Gene:AT2G16005 / 816096 AraportID:AT2G16005 Length:160 Species:Arabidopsis thaliana


Alignment Length:135 Identity:33/135 - (24%)
Similarity:53/135 - (39%) Gaps:18/135 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FQTCEDSVD-SCSISQVRVTPCP-EANANAACHIRRRHRFTMSFDFTPHFDADTLVASLGWAKSE 88
            ||||:...: ...:|.|.::|.| :.:.|....|.         ..|....:|.:..:|..|.. 
plant    27 FQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITIT---------GVTNKEISDGVTVNLKLAVG- 81

  Fly    89 NVELPLLTMDQEACKYTTCPVRSG-VTQTYTNNM-PADARFPLSPYTIRWALKD-PVSQKRCCFT 150
              ..|:.|.....|..|.|||..| :..|..|.. |.:.|..:. |||..::.| |:.:...|..
plant    82 --MFPVSTKSYSLCDITACPVAPGPIVLTLPNIFTPREKRTAIG-YTIIISITDKPLKESMMCIL 143

  Fly   151 IDIKV 155
            ..:|:
plant   144 FVVKL 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2hNP_001247376.1 Npc2_like 26..153 CDD:238458 32/131 (24%)
AT2G16005NP_565385.1 PG-PI_TP 27..146 CDD:238459 32/131 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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