DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2h and Npc2b

DIOPT Version :9

Sequence 1:NP_001247376.1 Gene:Npc2h / 43649 FlyBaseID:FBgn0039801 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster


Alignment Length:166 Identity:36/166 - (21%)
Similarity:66/166 - (39%) Gaps:21/166 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRLSSLLPVAFALVLSSVSAEIVNFQTCEDSVDSCSISQVRVTPCPEANANAACHIRRRHRFTMS 66
            ::||..|.|.||.::...|:..|: |..:....:.:...|.::.||::.    |.::|....::.
  Fly     1 MKLSLGLFVIFAALIGFTSSTDVS-QCPKSKSKALAAGDVSISNCPKSK----CILKRNTEASIQ 60

  Fly    67 FDFTPHFDADTLVASLGWAKSENVELPL------------LTMDQEACKYTTCPVRSGVTQTYTN 119
            ....|..|...|.:.:   :...:::||            ...|:...|...||:::|...||.|
  Fly    61 MKIRPERDFQELTSDI---QGIILDVPLPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKN 122

  Fly   120 NMPADARFPLSPYTIRWALKDPVSQKRCCFTIDIKV 155
            :......:|.....|.|.|.|.... ..||.|..|:
  Fly   123 SFKILPVYPTVSLEIHWGLGDKHGD-AACFQIPAKI 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2hNP_001247376.1 Npc2_like 26..153 CDD:238458 27/138 (20%)
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 28/140 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6567
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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