DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2h and Npc2a

DIOPT Version :9

Sequence 1:NP_001247376.1 Gene:Npc2h / 43649 FlyBaseID:FBgn0039801 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_608637.1 Gene:Npc2a / 33374 FlyBaseID:FBgn0031381 Length:148 Species:Drosophila melanogaster


Alignment Length:157 Identity:38/157 - (24%)
Similarity:62/157 - (39%) Gaps:12/157 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRLSSLLPVAFALVLSSVSAEIVNFQTCEDSVDSCSISQVRVTPCPEANANAACHIRRRHRFTM 65
            |||.:.:  ...|||   |.|..:.|..|.....  ..::|.:..|.  ...|.|.::|....:.
  Fly     1 MLRYAVI--ACAALV---VFAGALEFSDCGSKTG--KFTRVAIEGCD--TTKAECILKRNTTVSF 56

  Fly    66 SFDFTPHFDADTLVASLGWAKSENVELPLLTMDQEAC--KYTTCPVRSGVTQTYTNNMPADARFP 128
            |.||....:| |.|.::...|...:|:|....:.:||  ....||:....:..||..:|....:|
  Fly    57 SIDFALAEEA-TAVKTVVHGKVLGIEMPFPLANPDACVDSGLKCPLEKDESYRYTATLPVLRSYP 120

  Fly   129 LSPYTIRWALKDPVSQKRCCFTIDIKV 155
            .....::|.|:|.......|..|..|:
  Fly   121 KVSVLVKWELQDQDGADIICVEIPAKI 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2hNP_001247376.1 Npc2_like 26..153 CDD:238458 29/128 (23%)
Npc2aNP_608637.1 Npc2_like 21..145 CDD:238458 29/128 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451265
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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