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Protein Alignment Npc2h and Npc2e
DIOPT Version :9
Sequence 1: | NP_001247376.1 |
Gene: | Npc2h / 43649 |
FlyBaseID: | FBgn0039801 |
Length: | 157 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_731439.2 |
Gene: | Npc2e / 326136 |
FlyBaseID: | FBgn0051410 |
Length: | 168 |
Species: | Drosophila melanogaster |
Alignment Length: | 164 |
Identity: | 37/164 - (22%) |
Similarity: | 63/164 - (38%) |
Gaps: | 25/164 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRLSSLLPVAFALVLSSVSAEIVNFQTCEDS---VDSCSISQVRVTPCPEANANAACHIRRRHR 62
||| :.|..||:|::|:| .|.|.|::. :| |.:..|.| ..|.:.:...
Fly 1 MLR----IVVTLALILATVNA--TNVQQCKNKPFPLD------VNIKDCEE----PPCVVYKGTI 49
Fly 63 FTMSFDFTPHFDADTLVASLGWAKSENVELPLLTMDQ--EACKY----TTCPVRSGVTQTYTNNM 121
..|...|..:.:....:.:...||...:.||....|: :.|:. ..||:......||..|.
Fly 50 AVMEVHFLGNNNNIKSITATTTAKVLGMNLPYALPDEVSDVCRNLLYGAICPIDKDEDVTYQFNF 114
Fly 122 PADARFPLSPYTIRWALKDPVSQKRCCFTIDIKV 155
..:..||.....:...|.|..::...||.:..|:
Fly 115 YVEPSFPEITADVTVTLNDAQNEPITCFVVSCKI 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Npc2h | NP_001247376.1 |
Npc2_like |
26..153 |
CDD:238458 |
26/135 (19%) |
Npc2e | NP_731439.2 |
ML |
20..144 |
CDD:294195 |
26/133 (20%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45451267 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11306 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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