DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2g and AT3G44100

DIOPT Version :9

Sequence 1:NP_001247375.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_189996.1 Gene:AT3G44100 / 823530 AraportID:AT3G44100 Length:152 Species:Arabidopsis thaliana


Alignment Length:166 Identity:32/166 - (19%)
Similarity:57/166 - (34%) Gaps:39/166 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSLQAVAIAIVLISSSASAEVVNFEPCPDSVDTCTIQQVRVSPCPEALNNAACNIRRKHNSEMSF 69
            |..|.:.:.::.:....:....:|..|...:|...:..|::||.| .::.||...:         
plant     4 SQAQPLLLLLLSVFFLPALHATSFTYCDKRLDPVKVTGVKISPDP-VVSGAAATFK--------- 58

  Fly    70 DFTPNFDADTLVASLGWAKSEN--------VELPLLTLDSAACKYTPCPVRSGV-----KQTYTT 121
                      :..|.|...|..        |.:|:.|.....|..|.|||..|.     .||..:
plant    59 ----------IFGSTGEDISGGKVVIRVLYVGIPVHTETHDLCDETACPVAPGSFVLSHSQTLPS 113

  Fly   122 LVPIEAKFPLSPYTIRWALKDPVSQKRCCFTIDIKV 157
            :.|     | ..||::..:.|....:..|.:...|:
plant   114 ITP-----P-GTYTLKMTINDKNGGRLTCISFKFKI 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_001247375.1 Npc2_like 28..155 CDD:238458 29/139 (21%)
AT3G44100NP_189996.1 PG-PI_TP 27..141 CDD:238459 29/139 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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