DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2g and AT3G11780

DIOPT Version :9

Sequence 1:NP_001247375.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001189862.1 Gene:AT3G11780 / 820352 AraportID:AT3G11780 Length:171 Species:Arabidopsis thaliana


Alignment Length:186 Identity:42/186 - (22%)
Similarity:72/186 - (38%) Gaps:55/186 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRPSSLQAVAIA-IVLISSSASAEVVNFEPCPDSVD-TCTIQQVRVSPCPEALNNAACNIRRKH 63
            |.:.:...::||: .:|:|:..:|..|::  |.::.: ...:|.|.::|.|.|....|       
plant     1 MSKFTGFSSLAISYFLLVSTIVAATDVHY--CDNNEEYEVKVQGVDITPYPIARGEPA------- 56

  Fly    64 NSEMSFDFTPNFDADTL-------VASLGW-AKSENVELPLLTLDSAACKYTPCPVRSG------ 114
                :|..:.|.|.:..       |:..|| ..||..:|         |..|.|||..|      
plant    57 ----TFRISANTDTEISSGKLVIEVSYFGWHIHSETHDL---------CDETSCPVAIGDFLVAH 108

  Fly   115 --VKQTYTTLVPIEAKFPL-----------SPYTIRWALKDPVSQKRCC--FTIDI 155
              |...||.  |.|.:|.|           ..|:::..:.|...::..|  |:.||
plant   109 SQVLPGYTP--PTEKRFNLVSIAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDI 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_001247375.1 Npc2_like 28..155 CDD:238458 33/156 (21%)
AT3G11780NP_001189862.1 PG-PI_TP 27..160 CDD:238459 34/156 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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