DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2g and AT3G11780

DIOPT Version :10

Sequence 1:NP_651823.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001189862.1 Gene:AT3G11780 / 820352 AraportID:AT3G11780 Length:171 Species:Arabidopsis thaliana


Alignment Length:186 Identity:42/186 - (22%)
Similarity:72/186 - (38%) Gaps:55/186 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRPSSLQAVAIA-IVLISSSASAEVVNFEPCPDSVD-TCTIQQVRVSPCPEALNNAACNIRRKH 63
            |.:.:...::||: .:|:|:..:|..|::  |.::.: ...:|.|.::|.|.|....|       
plant     1 MSKFTGFSSLAISYFLLVSTIVAATDVHY--CDNNEEYEVKVQGVDITPYPIARGEPA------- 56

  Fly    64 NSEMSFDFTPNFDADTL-------VASLGW-AKSENVELPLLTLDSAACKYTPCPVRSG------ 114
                :|..:.|.|.:..       |:..|| ..||..:|         |..|.|||..|      
plant    57 ----TFRISANTDTEISSGKLVIEVSYFGWHIHSETHDL---------CDETSCPVAIGDFLVAH 108

  Fly   115 --VKQTYTTLVPIEAKFPL-----------SPYTIRWALKDPVSQKRCC--FTIDI 155
              |...||.  |.|.:|.|           ..|:::..:.|...::..|  |:.||
plant   109 SQVLPGYTP--PTEKRFNLVSIAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDI 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_651823.1 Npc2_like 28..155 CDD:238458 33/156 (21%)
AT3G11780NP_001189862.1 PG-PI_TP 27..160 CDD:238459 34/156 (22%)

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