DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Npc2g and AT2G16005

DIOPT Version :9

Sequence 1:NP_001247375.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_565385.1 Gene:AT2G16005 / 816096 AraportID:AT2G16005 Length:160 Species:Arabidopsis thaliana


Alignment Length:144 Identity:34/144 - (23%)
Similarity:54/144 - (37%) Gaps:27/144 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FEP--CPDSVDTC--------TIQQVRVSPCPEALNNAACNIRRKHNSEMSFDFTPNFD-ADTLV 81
            |.|  |.....||        .:..|.:||.|         ::|..|.|::.....|.: :|.:.
plant    18 FSPALCGPKFQTCDTGKEYPLKVSSVEISPDP---------VKRSGNGEITITGVTNKEISDGVT 73

  Fly    82 ASLGWAKSENVELPLLTLDSAACKYTPCPVRSG--VKQTYTTLVPIEAKFPLSPYTIRWALKD-P 143
            .:|..|..   ..|:.|...:.|..|.|||..|  |........|.|.:..:. |||..::.| |
plant    74 VNLKLAVG---MFPVSTKSYSLCDITACPVAPGPIVLTLPNIFTPREKRTAIG-YTIIISITDKP 134

  Fly   144 VSQKRCCFTIDIKV 157
            :.:...|....:|:
plant   135 LKESMMCILFVVKL 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_001247375.1 Npc2_like 28..155 CDD:238458 33/140 (24%)
AT2G16005NP_565385.1 PG-PI_TP 27..146 CDD:238459 30/131 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.