DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2g and npc2.2

DIOPT Version :10

Sequence 1:NP_651823.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001122191.1 Gene:npc2.2 / 565099 ZFINID:ZDB-GENE-080723-11 Length:149 Species:Danio rerio


Alignment Length:150 Identity:34/150 - (22%)
Similarity:65/150 - (43%) Gaps:10/150 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAIVLISSSA--SAEVVNFEPCPDSVDTCTIQQVRVSPCPEALNNAACNIRRKHNSEMSFDFTPN 74
            :|::|:|..|  .|:.|.|..| .||.. .:.||.:.||    :...|.:.:..:..::..|..:
Zfish     6 LAVILLSFLAYTCADPVKFVDC-GSVHG-KVVQVDIKPC----SQQPCQLHKGQSYTVNVTFISS 64

  Fly    75 FDADTLVASL-GWAKSENVELPLLTLDSAACKYTPCPVRSGVKQTYTTLVPIEAKFPLSPYTIRW 138
            ..:.|..|.: |..:...|..| :.:|........||:.......|.|.:|::.::|.....:.|
Zfish    65 VASQTSKAVVHGVVECVPVPFP-IPIDDGCKSGIQCPIVPQKPYNYVTELPVKTEYPAIKVVVEW 128

  Fly   139 ALKDPVSQKRCCFTIDIKVV 158
            .|:|..|:...|....:::|
Zfish   129 ELRDDSSKDLFCIKFPVQIV 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_651823.1 Npc2_like 28..155 CDD:238458 27/127 (21%)
npc2.2NP_001122191.1 Npc2_like 24..145 CDD:238458 27/127 (21%)

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