DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2g and Npc2b

DIOPT Version :10

Sequence 1:NP_651823.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster


Alignment Length:165 Identity:39/165 - (23%)
Similarity:60/165 - (36%) Gaps:24/165 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLQAVAIAIVLISSSASAEVVNFEPCPDSVD-TCTIQQVRVSPCPEALNNAACNIRRKHNSEMSF 69
            ||....|...||..::|.:|   ..||.|.. ......|.:|.||:    :.|.::|...:.:..
  Fly     4 SLGLFVIFAALIGFTSSTDV---SQCPKSKSKALAAGDVSISNCPK----SKCILKRNTEASIQM 61

  Fly    70 DFTPNFDADTLVASLGWAKSENVELPL------------LTLDSAACKYTPCPVRSGVKQTYTTL 122
            ...|..|...|.:.:   :...:::||            ...|.|..|...||:::|...||...
  Fly    62 KIRPERDFQELTSDI---QGIILDVPLPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKNS 123

  Fly   123 VPIEAKFPLSPYTIRWALKDPVSQKRCCFTIDIKV 157
            ..|...:|.....|.|.|.|.... ..||.|..|:
  Fly   124 FKILPVYPTVSLEIHWGLGDKHGD-AACFQIPAKI 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_651823.1 Npc2_like 28..155 CDD:238458 31/139 (22%)
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 32/142 (23%)

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