DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2g and Npc2b

DIOPT Version :9

Sequence 1:NP_001247375.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster


Alignment Length:165 Identity:39/165 - (23%)
Similarity:60/165 - (36%) Gaps:24/165 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLQAVAIAIVLISSSASAEVVNFEPCPDSVD-TCTIQQVRVSPCPEALNNAACNIRRKHNSEMSF 69
            ||....|...||..::|.:|   ..||.|.. ......|.:|.||:    :.|.::|...:.:..
  Fly     4 SLGLFVIFAALIGFTSSTDV---SQCPKSKSKALAAGDVSISNCPK----SKCILKRNTEASIQM 61

  Fly    70 DFTPNFDADTLVASLGWAKSENVELPL------------LTLDSAACKYTPCPVRSGVKQTYTTL 122
            ...|..|...|.:.:   :...:::||            ...|.|..|...||:::|...||...
  Fly    62 KIRPERDFQELTSDI---QGIILDVPLPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKNS 123

  Fly   123 VPIEAKFPLSPYTIRWALKDPVSQKRCCFTIDIKV 157
            ..|...:|.....|.|.|.|.... ..||.|..|:
  Fly   124 FKILPVYPTVSLEIHWGLGDKHGD-AACFQIPAKI 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_001247375.1 Npc2_like 28..155 CDD:238458 31/139 (22%)
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 32/142 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6567
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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