DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Npc2g and Npc2d

DIOPT Version :10

Sequence 1:NP_651823.1 Gene:Npc2g / 43648 FlyBaseID:FBgn0039800 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_649975.1 Gene:Npc2d / 41232 FlyBaseID:FBgn0037782 Length:173 Species:Drosophila melanogaster


Alignment Length:172 Identity:48/172 - (27%)
Similarity:66/172 - (38%) Gaps:41/172 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VAIAIVLISSSASAEVVNFEPCPDSVDTCTIQ-----QVRVSPCPEALNNAACNIRRKHNSEMSF 69
            |.|::.|:.|.|.|:.   |....||..|:..     :|||..|.    ...|.|.:....:...
  Fly     7 VLISLGLLLSLAEAQQ---EHPATSVKKCSGSKPFPLEVRVHNCV----TPPCQIVKGTTQKFEI 64

  Fly    70 DFTPN---FDADTLV--ASLGWAKSENVELPL-LTLDSAACKYTPCP-VRSGVKQTYTTLVPIE- 126
            ||..:   ....|||  .:||     .:.:|. |..|.||.    || ::.|   .|..|.|.| 
  Fly    65 DFAVDKYITQLTTLVKATTLG-----IITVPYELPADVAAV----CPNLQYG---AYCPLYPTED 117

  Fly   127 ----AKFPLSPY-----TIRWALKDPVSQKRCCFTIDIKVVR 159
                ..||:..|     .|...|.|..::...||..|||||:
  Fly   118 VSYLFTFPIGEYPEIGVKIEIYLVDQDNEIATCFVCDIKVVK 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2gNP_651823.1 Npc2_like 28..155 CDD:238458 37/148 (25%)
Npc2dNP_649975.1 Npc2_like 29..155 CDD:238458 35/141 (25%)

Return to query results.
Submit another query.