DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11313 and Cfd

DIOPT Version :10

Sequence 1:NP_651821.3 Gene:CG11313 / 43646 FlyBaseID:FBgn0039798 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:226 Identity:67/226 - (29%)
Similarity:111/226 - (49%) Gaps:28/226 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 CAGSLINNRYVVTAAHCVSAATRARKGDVSFRVSVRLGEHNTSAVVDCLNGRCLPEPVQ--IAVE 209
            |.|:|::.::|::||||:...|   |.:|   |.|.||.|:.|:          |||.:  ..|:
  Rat    51 CGGTLVDEQWVLSAAHCMDGVT---KDEV---VQVLLGAHSLSS----------PEPYKHLYDVQ 99

  Fly   210 EIRIHESFGTRLFWNDIALIRLAREVAYSPSIRPVCLPSTVGLQNWQSGQAFTVAGWGRTLTSES 274
            .:.:|.........:|:.|.:|:...:..|.:||  ||.....:..:.|....|||||....:..
  Rat   100 SVVLHPGSRPDSVEDDLMLFKLSHNASLGPHVRP--LPLQREDREVKPGTLCDVAGWGVVTHAGR 162

  Fly   275 SP-VKMKLRVTYVEPGLCRRKYASIVVLGDSHLCAEGRSRGDSCDGDSGGPLMAFHEGVWVLGGI 338
            .| |..:|.|:.::...|..:......:..:.:|||. :|.|:|.|||||||:...    .:..:
  Rat   163 RPDVLQQLTVSIMDRNTCNLRTYHDGAITKNMMCAES-NRRDTCRGDSGGPLVCGD----AVEAV 222

  Fly   339 VSFGLN-CGSRFWPAVYTNVLSYETWITQNI 368
            |::|.. ||:|..|.|:|.|.:|..|| :|:
  Rat   223 VTWGSRVCGNRRKPGVFTRVATYVPWI-ENV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11313NP_651821.3 CLIP 24..78 CDD:463440
Tryp_SPc 116..367 CDD:238113 66/223 (30%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 66/224 (29%)
Self-inhibitor loop. /evidence=ECO:0000250|UniProtKB:P00746 224..228 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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