DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11313 and tmprss2

DIOPT Version :10

Sequence 1:NP_651821.3 Gene:CG11313 / 43646 FlyBaseID:FBgn0039798 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:274 Identity:87/274 - (31%)
Similarity:127/274 - (46%) Gaps:44/274 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 CGGDIAYNQITKGNETVLTE--FAWMVLLEYRPHDGQQLRTYCAGSLINNRYVVTAAHCVSAATR 169
            ||.... |:|. |..||.::  :.|.|.|.|   .|:.|   |.||:|...:::||||||...:.
Zfish   244 CGRSTG-NRIV-GGTTVTSKGVWPWQVSLHY---SGRHL---CGGSIITPYWILTAAHCVHQFSN 300

  Fly   170 ARKGDVSFRVSVRLGEHNTSAVVDCLNGRCLPEPVQIAVEEIRIHESFGTRLFWNDIALIRLARE 234
            .....|       ...:.|.:.:...:|.        :|..|.||: |......|||||:||...
Zfish   301 PGGWTV-------YAGYLTQSEMASASGN--------SVNRIVIHD-FNPNTNENDIALMRLNTA 349

  Fly   235 VAYSPSIRPVCLPSTVGLQNWQSGQAFT------VAGWGRTLTSESSPVKM-KLRVTYVEPGLCR 292
            :..|.:|||||||:        .|.:||      |.|||...:..||...: :.::..::..:|.
Zfish   350 LTISTNIRPVCLPN--------KGMSFTAQQDCYVTGWGALFSGGSSSATLQEAKIQLIDSTICN 406

  Fly   293 RKYASIVVLGDSHLCAEGRSRG--DSCDGDSGGPLMAFHEGVWVLGGIVSFGLNCGSRFWPAVYT 355
            .:.....::.|:.:|| |:..|  |||.|||||||:.....:|.|.|..|:|..|..|..|.||.
Zfish   407 SRPVYNGLITDTMICA-GKLAGGVDSCQGDSGGPLVTNVRSLWWLLGDTSWGDGCAVRNKPGVYG 470

  Fly   356 NVLSYETWITQNIR 369
            ||..:..||.|.:|
Zfish   471 NVTYFLDWIYQQMR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11313NP_651821.3 CLIP 24..78 CDD:463440
Tryp_SPc 116..367 CDD:238113 82/261 (31%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:470597 2/3 (67%)
Tryp_SPc 252..482 CDD:238113 82/261 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.