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Protein Alignment CG11313 and Tmprss11c

DIOPT Version :10

Sequence 1:	NP_651821.3	Gene:	CG11313 / 43646	FlyBaseID:	FBgn0039798	Length:	370	Species:	Drosophila melanogaster
Sequence 2:	NP_001399454.1	Gene:	Tmprss11c / 408213	RGDID:	1302967	Length:	431	Species:	Rattus norvegicus

Alignment Length:	313	Identity:	98/313 - (31%)
Similarity:	141/313 - (45%)	Gaps:	55/313 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    62 ESRCLVSDQSDLPFVCCTPDTDYNTTRARPNDEVIHSTLLPDRSICGGDIAYNQITKGNETVLTE 126
            ::|.|: |.|...|          :..|.|..|.:.:|....|:|..|.   :::..|.:....|
  Rat   160 QTRLLI-DSSSFKF----------SDIAMPIAEDLLNTCCGRRTITPGG---HKVAGGQDAEEGE 210

  Fly   127 FAWMVLLEYRPHDGQQLRTY-CAGSLINNRYVVTAAHCVSAATRARKGDVSFRVSVRLGEHNTSA 190
            :.|...|       ||...: |..:||:|.:::|||||...:...:...|||
  Rat   211 WPWQASL-------QQNNVHRCGATLISNSWLITAAHCFVRSANPKDWKVSF------------- 255

  Fly   191 VVDCLNGRCLPEP-VQIAVEEIRIHESFGTRLFWNDIALIRLAREVAYSPSIRPVCLPSTVGLQN 254
                  |..|.:| .|.||:.|.|||::......||||::||:..|.|..:||..|||...  |.
  Rat   256 ------GFLLSKPQAQRAVKSIVIHENYSYPAHNNDIAVVRLSSPVLYENNIRRACLPEAT--QK 312

  Fly   255 WQSGQAFTVAGWGRTLTSESSP-VKMKLRVTYVEPGLCR--RKYASIVVLGDSHLCA---EGRSR 313
            :.......|.|||...:...|| :..|.||..::...|.  :.|..::..|  .|||   |||.
  Rat   313 FPPNSDVVVTGWGTLKSDGDSPNILQKGRVKIIDNKTCNSGKAYGGVITPG--MLCAGFLEGRV- 374

  Fly   314 GDSCDGDSGGPLMA-FHEGVWVLGGIVSFGLNCGSRFWPAVYTNVLSYETWIT 365
             |:|.|||||||:: ..:|:|.|.||||:|..|.....|.|||.|..|..||:
  Rat   375 -DACQGDSGGPLVSEDSKGIWFLAGIVSWGDECALPNKPGVYTRVTHYRDWIS 426

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.