DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11313 and Clipb4

DIOPT Version :10

Sequence 1:NP_651821.3 Gene:CG11313 / 43646 FlyBaseID:FBgn0039798 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_061505120.1 Gene:Clipb4 / 3290783 VectorBaseID:AGAMI1_007833 Length:737 Species:Anopheles gambiae


Alignment Length:352 Identity:129/352 - (36%)
Similarity:187/352 - (53%) Gaps:27/352 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VSCRNPNQRTGYCVNIPLCVPLNSVLAKSNPTDSEMRFIRESRCLVSDQSDLPFVCCTPDTDYNT 86
            |:|..|...:|.|:....|.||.::..|...|..:...:.:|||.:..:..|  |||..     |
Mosquito   407 VNCVTPLGESGKCILFRECQPLITIYNKPINTHDDTLLLTQSRCGMLQRKTL--VCCPV-----T 464

  Fly    87 TRARPNDEVIHSTLLPDRSICGGDIAYNQITKGNETVLTEFAWMVLLEYRPHDGQQLRTYCAGSL 151
            ::||.:        ||:..:||..:| :::..|..|.:.||.|..|:|::..|| ....:|.|||
Mosquito   465 SQARSS--------LPEPPVCGIHLA-DRVIGGQPTQIDEFPWTALIEFQKPDG-SFGFHCGGSL 519

  Fly   152 INNRYVVTAAHCVSAATRARKGDVSFRVSVRLGEHNTSAVVDCLNGRCLPEPVQIAVEEIRIHES 216
            ||:||:||||||:.:..|..|..     .|||||.:.::..||.|..|...|:.:.:|:|.:|..
Mosquito   520 INDRYIVTAAHCIKSIPRGWKVH-----RVRLGEWDLTSANDCQNEFCSDAPIDLDIEQIVVHTG 579

  Fly   217 FGTR--LFWNDIALIRLAREVAYSPSIRPVCLPSTVGLQNW-QSGQAFTVAGWGRTLTSESSPVK 278
            :.|:  ...|||||||..|.|.||.::||:|||.:..|:|. .:|.....||||:|.::.:|..|
Mosquito   580 YDTKDQSNANDIALIRFTRPVNYSQTVRPICLPLSSSLRNRNHAGMPAYAAGWGKTESATASEKK 644

  Fly   279 MKLRVTYVEPGLCRRKY-ASIVVLGDSHLCAEGRSRGDSCDGDSGGPLMAFHEGVWVLGGIVSFG 342
            :|:.:.......|...| ...::|..:|:||.|....|:|.||||||||....|.|.|.|:||||
Mosquito   645 LKVEMNIKSLQECAPVYQRGGILLKKTHMCAGGVRGKDTCSGDSGGPLMRQMSGSWYLIGVVSFG 709

  Fly   343 -LNCGSRFWPAVYTNVLSYETWITQNI 368
             ..||:...|.|||||..|..||..||
Mosquito   710 PQKCGAPGVPGVYTNVAEYVDWIKDNI 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11313NP_651821.3 CLIP 24..78 CDD:463440 14/53 (26%)
Tryp_SPc 116..367 CDD:238113 102/255 (40%)
Clipb4XP_061505120.1 None

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